RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MAGEB16A2A368 324 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 H7C4K7 107 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 PSMD3O43242 534 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 MT-CYBP00156 380 aaPredicted RBP29.02■■■□□ 2.24
SAMD1-202ENST00000533683 ITGA2BP08514 1039 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 NEFHP12036 1026 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 ATN1P54259 1190 aaPredicted RBP29.02■■■□□ 2.24
SAMD1-202ENST00000533683 PRSS55Q6UWB4 352 aaPredicted RBP29.02■■■□□ 2.24
SAMD1-202ENST00000533683 FAM43BQ6ZT52 329 aaPredicted RBP29.02■■■□□ 2.24
SAMD1-202ENST00000533683 ANKS3Q6ZW76 656 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 MIB1Q86YT6 1006 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 PRDM5Q9NQX1 630 aaPredicted RBP29.02■■■□□ 2.24
SAMD1-202ENST00000533683 CHRAC1Q9NRG0 131 aa29.02■■■□□ 2.24
SAMD1-202ENST00000533683 TOP3BO95985 862 aaKnown RBP29.01■■■□□ 2.23
SAMD1-202ENST00000533683 PSEN1P49768 467 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 SMARCB1Q12824 385 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 BNIP1Q12981 228 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 FRG1Q14331 258 aaKnown RBP29.01■■■□□ 2.23
SAMD1-202ENST00000533683 TRIP4Q15650 581 aaPredicted RBP29.01■■■□□ 2.23
SAMD1-202ENST00000533683 FYB2Q5VWT5 728 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 LINC00523Q86TU6 105 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 PACS2Q86VP3 889 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 MECRQ9BV79 373 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 HIPK3Q9H422 1215 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 NPHS2Q9NP85 383 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 MARCH2Q9P0N8 246 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 OVGP1Q12889 678 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 C10orf120Q5SQS8 335 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 TIGD7Q6NT04 549 aaPredicted RBP29.01■■■□□ 2.23
SAMD1-202ENST00000533683 CNPY4Q8N129 248 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 ACMSDQ8TDX5 336 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 CPNE1Q99829 537 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 OLA1Q9NTK5 396 aaKnown RBP29.01■■■□□ 2.23
SAMD1-202ENST00000533683 TXNDC16Q9P2K2 825 aa29.01■■■□□ 2.23
SAMD1-202ENST00000533683 DOCK4Q8N1I0 1966 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 TPP1O14773 563 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 CXCL10P02778 98 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 GP5P40197 560 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 CCDC15Q0P6D6 951 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 TFAP2DQ7Z6R9 452 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 LRRC49Q8IUZ0 686 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 RBM22Q9NW64 420 aaKnown RBP eCLIP29■■■□□ 2.23
SAMD1-202ENST00000533683 FNIP2Q9P278 1114 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 IPO11Q9UI26 975 aaKnown RBP29■■■□□ 2.23
SAMD1-202ENST00000533683 SOX13Q9UN79 622 aa29■■■□□ 2.23
SAMD1-202ENST00000533683 AP3B1O00203 1094 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 HLA-DQB2P05538 268 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 UMODL1-AS1Q8N2C9 162 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 ATP6V0D2Q8N8Y2 350 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 BTN2A3PQ96KV6 586 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 ZYG11BQ9C0D3 744 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 OGDHLQ9ULD0 1010 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 CDY1Q9Y6F8 540 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 KLF11O14901 512 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 ANXA9O76027 345 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 RHOQP17081 205 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 TTC31Q49AM3 519 aaPredicted RBP28.99■■■□□ 2.23
SAMD1-202ENST00000533683 LRRC43Q8N309 656 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 GIPC2Q8TF65 315 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 TBL1YQ9BQ87 522 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 PPP1R12CQ9BZL4 782 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 PPARGC1AQ9UBK2 798 aaKnown RBP28.99■■■□□ 2.23
SAMD1-202ENST00000533683 CHKBQ9Y259 395 aa28.99■■■□□ 2.23
SAMD1-202ENST00000533683 CNTN5O94779 1100 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 TROVE2P10155 538 aaKnown RBP eCLIP28.98■■■□□ 2.23
SAMD1-202ENST00000533683 PDE1BQ01064 536 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 PDE1CQ14123 709 aaPredicted RBP28.98■■■□□ 2.23
SAMD1-202ENST00000533683 ALFQ53S48 1182 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 GRTP1Q5TC63 336 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 DEFB128Q7Z7B8 93 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 AGAP2Q99490 1192 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 SAGE1Q9NXZ1 904 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 TANC1Q9C0D5 1861 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 HMBSP08397 361 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 ALDH3A1P30838 453 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 HSP90AA5PQ58FG0 334 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 TEDDM1Q5T9Z0 273 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 IPMKQ8NFU5 416 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 C2orf15Q8WU43 125 aaKnown RBP28.98■■■□□ 2.23
SAMD1-202ENST00000533683 SLC40A1Q9NP59 571 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 TMEM248Q9NWD8 314 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 COMMD8Q9NX08 183 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 SIRPGQ9P1W8 387 aa28.98■■■□□ 2.23
SAMD1-202ENST00000533683 IGLV3-10A0A075B6K4 115 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 SLC12A8A0AV02 714 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 ADAM12O43184 909 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 IGLV3-27P01718 113 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 DNAJB2P25686 324 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 NMBRP28336 390 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 RPL10AP62906 217 aaKnown RBP28.97■■■□□ 2.23
SAMD1-202ENST00000533683 RFWD2Q8NHY2 731 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 OXCT2Q9BYC2 517 aaPredicted RBP28.97■■■□□ 2.23
SAMD1-202ENST00000533683 ECT2Q9H8V3 914 aa28.97■■■□□ 2.23
SAMD1-202ENST00000533683 ZDHHC11BP0C7U3 371 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 ATF6P18850 670 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 NDST2P52849 883 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 NCALDP61601 193 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 RAP1GAP2Q684P5 730 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 FBXL22Q6P050 247 aa28.96■■■□□ 2.23
SAMD1-202ENST00000533683 STRA8Q7Z7C7 330 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms