RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CDKN2BP42772 138 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 NUMBP49757 651 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 NDST2P52849 883 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 YBEYP58557 167 aaPredicted RBP13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 GPS2Q13227 327 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 C2orf27AQ580R0 203 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 MAP7D3Q8IWC1 876 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 TP53INP2Q8IXH6 220 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 CYB5D2Q8WUJ1 264 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 CALN1Q9BXU9 219 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 CIPCQ9C0C6 399 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 SLC39A8Q9C0K1 460 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 PACSIN2Q9UNF0 486 aaPredicted RBP13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
RPUSD4-208ENST00000533628 RASA4BC9J798 803 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 RASA4O43374 803 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 SNAP91O60641 907 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 RAMP2O60895 175 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ASLP04424 464 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 GLDCP23378 1020 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ZNF234Q14588 700 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 PAFAH1B3Q15102 231 aaKnown RBP13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 NCBP2-AS2Q69YL0 99 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ALLCQ8N6M5 410 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 IER2Q9BTL4 223 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 TMEM245Q9H330 911 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 CD248Q9HCU0 757 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 KCND1Q9NSA2 647 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 VPS28Q9UK41 221 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ERVW-1Q9UQF0 538 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 ATG2BQ96BY7 2078 aa13.02□□□□□ -0.33
RPUSD4-208ENST00000533628 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SGK1O00141 431 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 CD160O95971 181 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 IL12RB1P42701 662 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 GYS2P54840 703 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ECT2LQ008S8 904 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 MTAPQ13126 283 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 POLD3Q15054 466 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SLC9A4Q6AI14 798 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SPEM1Q8N4L4 309 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 LZTR1Q8N653 840 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 NETO2Q8NC67 525 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 HMCESQ96FZ2 354 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 CELF6Q96J87 481 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 GABRG3Q99928 467 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 POLR3BQ9NW08 1133 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 WASH3PC4AMC7 463 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 NPC1O15118 1278 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 KDELR3O43731 214 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 KLF8O95600 359 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SRPRAP08240 638 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ARF5P84085 180 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SERINC3Q13530 473 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 PARP15Q460N3 678 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 TMCO3Q6UWJ1 677 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 CCDC33Q8N5R6 958 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 PLD5Q8N7P1 536 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 KDM1BQ8NB78 822 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 TXNDC5Q8NBS9 432 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 ACDQ96AP0 544 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SPON2Q9BUD6 331 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 CACNA2D2Q9NY47 1150 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 SLCO3A1Q9UIG8 710 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 MMP17Q9ULZ9 603 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 STON1Q9Y6Q2 735 aa13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-208ENST00000533628 NUP205Q92621 2012 aa13□□□□□ -0.33
RPUSD4-208ENST00000533628 NYNRINQ9P2P1 1898 aaKnown RBP13□□□□□ -0.33
RPUSD4-208ENST00000533628 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
RPUSD4-208ENST00000533628 CXorf51AA0A1B0GTR3 108 aa13□□□□□ -0.33
RPUSD4-208ENST00000533628 MT-CO1P00395 513 aa13□□□□□ -0.33
RPUSD4-208ENST00000533628 PYGMP11217 842 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms