RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 PPARGC1AQ9UBK2 798 aaKnown RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 FZD10Q9ULW2 581 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 AP4E1Q9UPM8 1137 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 TBC1D30Q9Y2I9 924 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 IGLV3-10A0A075B6K4 115 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 MEI4A8MW99 385 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 EEF2KO00418 725 aaKnown RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 RHOQP17081 205 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 MIPP30301 263 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 HNRNPH3P31942 346 aaKnown RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 MAPKAPK2P49137 400 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 DNA2P51530 1060 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 TPMTP51580 245 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 AIF1P55008 147 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 GNA12Q03113 381 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ZNF252P-AS1Q0IIN9 211 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 SLC18A3Q16572 532 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ZFYVE27Q5T4F4 411 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 PMS2CLQ68D20 193 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 GAS2L3Q86XJ1 694 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 STK40Q8N2I9 435 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 DCAF4L2Q8NA75 395 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 SNX19Q92543 992 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 HSPH1Q92598 858 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 PIGKQ92643 395 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ARHGEF26Q96DR7 871 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ANP32EQ9BTT0 268 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 SNRNP25Q9BV90 132 aaKnown RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 PACSIN1Q9BY11 444 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 CATSPERBQ9H7T0 1116 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 NHEJ1Q9H9Q4 299 aaPredicted RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 FBRSQ9HAH7 460 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 IP6K2Q9UHH9 426 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 VPS51Q9UID3 782 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 NUMA1Q14980 2115 aa11.75□□□□□ -0.53
UBASH3B-208ENST00000533451 IGHV1OR15-9A0A0B4J2B8 117 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 SSU72P8A0A1W2PR75 194 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 ILVBLA1L0T0 632 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 MYO1FO00160 1098 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RAMP2O60895 175 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 EPN2O95208 641 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 IL1BP01584 269 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 CYP1A2P05177 515 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 VAV1P15498 845 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 GLDCP23378 1020 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 CD6P30203 668 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 L1CAMP32004 1257 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 ETFBP38117 255 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 MPLP40238 635 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RECQLP46063 649 aaPredicted RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 PLK1P53350 603 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 COPAP53621 1224 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RPS14P62263 151 aaKnown RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 PIGHQ14442 188 aaPredicted RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 DLG2Q15700 870 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 Q6ZVU0 165 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 H2AFVQ71UI9 128 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 MMAAQ8IVH4 418 aaKnown RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RGL4Q8IZJ4 473 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 RYBPQ8N488 228 aaPredicted RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 C12orf50Q8NA57 414 aaPredicted RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 FNIP1Q8TF40 1166 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 OR8D1Q8WZ84 308 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 TOE1Q96GM8 510 aaKnown RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 MYO19Q96H55 970 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 LOXL4Q96JB6 756 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 ZC3H10Q96K80 434 aaKnown RBP11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 HSPA12BQ96MM6 686 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 CHP1Q99653 195 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 GPR174Q9BXC1 333 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 SMOC1Q9H4F8 434 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 TMEM248Q9NWD8 314 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 NCKAP1Q9Y2A7 1128 aa11.74□□□□□ -0.53
UBASH3B-208ENST00000533451 TARSL2A2RTX5 802 aaKnown RBP11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 FGF10O15520 208 aaPredicted RBP11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 LRCH4O75427 683 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 RNASEH2AO75792 299 aaKnown RBP11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 CFIP05156 583 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 OXTRP30559 389 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 ACVRL1P37023 503 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 ARL4AP40617 200 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 PI4KAP42356 2102 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 PTGER3P43115 390 aa11.73□□□□□ -0.53
UBASH3B-208ENST00000533451 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms