RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 HMGB4Q8WW32 186 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ATRIPQ8WXE1 791 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SPON2Q9BUD6 331 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 TPSD1Q9BZJ3 242 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 MKRN2Q9H000 416 aaKnown RBP12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SLC6A17Q9H1V8 727 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 GOLPH3Q9H4A6 298 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 HS3ST2Q9Y278 367 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 HYOU1Q9Y4L1 999 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 VPS13AQ96RL7 3174 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 CBX4O00257 560 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 DCLK1O15075 740 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 HRO43593 1189 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 BUB1O43683 1085 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 CD160O95971 181 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 C7P10643 843 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 SRCP12931 536 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 VAV1P15498 845 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 AMPD1P23109 780 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 NDST2P52849 883 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 ARF5P84085 180 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 CCZ1BP86790 482 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 CCZ1P86791 482 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-214ENST00000533209 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
SSBP3-214ENST00000533209 DPYSL3Q14195 570 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 KRT81Q14533 505 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 PDK2Q15119 407 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 PARP15Q460N3 678 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 C9orf64Q5T6V5 341 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 LRRC38Q5VT99 294 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 AFMIDQ63HM1 303 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 IL31Q6EBC2 164 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 C11orf63Q6NUN7 778 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 LINGO4Q6UY18 593 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 ARHGAP12Q8IWW6 846 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 SH2D3CQ8N5H7 860 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 NPWQ8N729 165 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 KCTD6Q8NC69 237 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 HMCESQ96FZ2 354 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 MRGPRX1Q96LB2 322 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 LRRC19Q9H756 370 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 KLHL11Q9NVR0 708 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 DONSONQ9NYP3 566 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 BCCIPQ9P287 314 aaKnown RBP eCLIP12.26□□□□□ -0.45
SSBP3-214ENST00000533209 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-214ENST00000533209 TRIM10Q9UDY6 481 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 MFHAS1Q9Y4C4 1052 aa12.26□□□□□ -0.45
SSBP3-214ENST00000533209 EDDM13A0A1B0GTR0 161 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 CXorf51AA0A1B0GTR3 108 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 TARSL2A2RTX5 802 aaKnown RBP12.25□□□□□ -0.45
SSBP3-214ENST00000533209 K7ERQ8 282 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 SMAD6O43541 496 aaKnown RBP12.25□□□□□ -0.45
SSBP3-214ENST00000533209 KDELR3O43731 214 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 SPOPO43791 374 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 SIN3BO75182 1162 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 NNMTP40261 264 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 SERINC3Q13530 473 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 GSE1Q14687 1217 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 DLG2Q15700 870 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 RETSATQ6NUM9 610 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 ZC3H14Q6PJT7 736 aaKnown RBP12.25□□□□□ -0.45
SSBP3-214ENST00000533209 RHOT1Q8IXI2 618 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 NETO2Q8NC67 525 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 FAF2Q96CS3 445 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 CELF6Q96J87 481 aaKnown RBP12.25□□□□□ -0.45
SSBP3-214ENST00000533209 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 CALR3Q96L12 384 aaKnown RBP12.25□□□□□ -0.45
SSBP3-214ENST00000533209 PHOX2BQ99453 314 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 CALN1Q9BXU9 219 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 SLC39A8Q9C0K1 460 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 ACTL7AQ9Y615 435 aa12.25□□□□□ -0.45
SSBP3-214ENST00000533209 C3orf70A6NLC5 250 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 ZBTB24O43167 697 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF821O75541 412 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 TNNT1P13805 278 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 KDELR1P24390 212 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 CNR2P34972 360 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 P2RY2P41231 377 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 SERPINH1P50454 418 aaKnown RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 PAPOLAP51003 745 aaKnown RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 CLCN6P51797 869 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 SLC20A2Q08357 652 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 KIF5AQ12840 1032 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 ACCSLQ4AC99 568 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 Q6ZVU0 165 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms