RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZSCAN23Q3MJ62 389 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 MANEALQ5VSG8 457 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 E4F1Q66K89 784 aaPredicted RBP31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 ZNF783Q6ZMS7 281 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 CCDC185Q8N715 623 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 DCAF4L2Q8NA75 395 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 VCPIP1Q96JH7 1222 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 NEUROG2Q9H2A3 272 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 ADAMTS1Q9UHI8 967 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 FZD4Q9ULV1 537 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 CACNA1EQ15878 2313 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 GOLGA6L19H0YKK7 550 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 BCAT2O15382 392 aaPredicted RBP31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 KCNK5O95279 499 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 SRCP12931 536 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 PRKCIP41743 596 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 RPL7AP62424 266 aaKnown RBP31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 FIGNQ5HY92 759 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 ZNF571Q7Z3V5 609 aaPredicted RBP31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 AADATQ8N5Z0 425 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 C1orf216Q8TAB5 229 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 OR8D1Q8WZ84 308 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 NTAN1Q96AB6 310 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 BIRC7Q96CA5 298 aa31.04■■■□□ 2.56
SSSCA1-207ENST00000533115 TMCO5BA8MYB1 307 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 CCP110O43303 1012 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 FSBPO95073 299 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 MT-CO1P00395 513 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 SKOR2Q2VWA4 1001 aaPredicted RBP31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 DCUN1D2Q6PH85 259 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 Q6ZVU0 165 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 DSG4Q86SJ6 1040 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 HDDC3Q8N4P3 179 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 MINDY1Q8N5J2 469 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 ATP11CQ8NB49 1132 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 OR7D4Q8NG98 312 aa31.03■■■□□ 2.56
SSSCA1-207ENST00000533115 FAM72CH0Y354 149 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 PLEKP08567 350 aaPredicted RBP31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 ADRB1P08588 477 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 GOT1P17174 413 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 GALCP54803 685 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 UBASH3AP57075 661 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 KLHL30Q0D2K2 578 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 FAM72AQ5TYM5 149 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 FAM72DQ6L9T8 149 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 RWDD4Q6NW29 188 aaKnown RBP31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 FAM72BQ86X60 149 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 MAGEB5Q9BZ81 275 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 ZDHHC5Q9C0B5 715 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 RETREG1Q9H6L5 497 aa31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 ASCC3Q8N3C0 2202 aaKnown RBP31.02■■■□□ 2.56
SSSCA1-207ENST00000533115 FAM47DPA6NHR8 397 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 MCF2LO15068 1137 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 ALOX15BO15296 676 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 OPHN1O60890 802 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 PBX1P40424 430 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 GNA12Q03113 381 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 SCAPQ12770 1279 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 GRIK2Q13002 908 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 KIAA0895LQ68EN5 471 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 PSAPL1Q6NUJ1 521 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 SLFN11Q7Z7L1 901 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 DRC7Q8IY82 874 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 OR2I1PQ8NGU4 316 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 CNPY3Q9BT09 278 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 SPON2Q9BUD6 331 aa31.01■■■□□ 2.55
SSSCA1-207ENST00000533115 LRRC72A6NJI9 287 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 K7ERQ8 282 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 LRIG2O94898 1065 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 GZMAP12544 262 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 RHOQP17081 205 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 CSRP1P21291 193 aaKnown RBP31■■■□□ 2.55
SSSCA1-207ENST00000533115 GLDCP23378 1020 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 NOVA1P51513 510 aaKnown RBP31■■■□□ 2.55
SSSCA1-207ENST00000533115 CLCN6P51797 869 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 FAM46CQ5VWP2 391 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 SCYL2Q6P3W7 929 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 NCEH1Q6PIU2 408 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 LINGO4Q6UY18 593 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 NLRP14Q86W24 1093 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 OR2T34Q8NGX1 318 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 TBC1D31Q96DN5 1066 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 ATP13A1Q9HD20 1204 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 PARVAQ9NVD7 372 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 DNAAF2Q9NVR5 837 aaKnown RBP31■■■□□ 2.55
SSSCA1-207ENST00000533115 SARDHQ9UL12 918 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 PPM1HQ9ULR3 514 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 NEU3Q9UQ49 428 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 SLCO1B1Q9Y6L6 691 aa31■■■□□ 2.55
SSSCA1-207ENST00000533115 CBX4O00257 560 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 SMAD6O43541 496 aaKnown RBP30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 BNIP3LO60238 219 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 IGHV4-34P06331 123 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 CD27P26842 260 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 DRD3P35462 400 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 MAPKAPK2P49137 400 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 MAMLD1Q13495 774 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 OSGEPQ9NPF4 335 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 NDFIP2Q9NV92 336 aa30.99■■■□□ 2.55
SSSCA1-207ENST00000533115 TMEM248Q9NWD8 314 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms