RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 MS4A13Q5J8X5 152 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 RGS9BPQ6ZS82 235 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 CFAP52Q8N1V2 620 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 SCML4Q8N228 414 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 IGSF8Q969P0 613 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 GRAMD1AQ96CP6 724 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 C8orf48Q96LL4 319 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 TMEM237Q96Q45 408 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 FICDQ9BVA6 458 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 RXFP1Q9HBX9 757 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 MYO16Q9Y6X6 1858 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 KCNA4P22459 653 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 PRPSAP1Q14558 356 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 FYB2Q5VWT5 728 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 MTDHQ86UE4 582 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 C10orf82Q8WW14 230 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 LRRC37BQ96QE4 947 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 IPO11Q9UI26 975 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 TLR6Q9Y2C9 796 aa13.66□□□□□ -0.22
CAPRIN1-212ENST00000532820 ZCWPW2A0A1B0GU75 182 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 FAM237BA0A1B0GVD1 139 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 MTSS1O43312 755 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 GJB3O75712 270 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 TYK2P29597 1187 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 KCNQ1P51787 676 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 N4BP2L1Q5TBK1 243 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 MANEALQ5VSG8 457 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 DPF3Q92784 378 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 C20orf27Q9GZN8 174 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 NOL6Q9H6R4 1146 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 ACSS2Q9NR19 701 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 STK38LQ9Y2H1 464 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RAD54BQ9Y620 910 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 NCALDP61601 193 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 BST1Q10588 318 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 MARK2Q7KZI7 788 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 NT5MQ9NPB1 228 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 USH1CQ9Y6N9 552 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 CSPG5O95196 566 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 CBX6O95503 412 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 FGFR3P22607 806 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 CCNCP24863 283 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 OR1D2P34982 312 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 COG7P83436 770 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RNF43Q68DV7 783 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 FBXL22Q6P050 247 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RFWD3Q6PCD5 774 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 TNS4Q8IZW8 715 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 MTBPQ96DY7 904 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 PRR11Q96HE9 360 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 RPRD1AQ96P16 312 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 TTPALQ9BTX7 342 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 UNKQ9C0B0 810 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 BRD8Q9H0E9 1235 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 GLOD4Q9HC38 313 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 SLC2A6Q9UGQ3 507 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 HAO1Q9UJM8 370 aa13.65□□□□□ -0.22
CAPRIN1-212ENST00000532820 PAX3P23760 479 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SERPINB9P50453 376 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 CBLBQ13191 982 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SEPT6Q14141 434 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SETDB1Q15047 1291 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 KCNMB4Q86W47 210 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 DCLK2Q8N568 766 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 FSD1LQ9BXM9 530 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 MTO1Q9Y2Z2 717 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 MATN3O15232 486 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 TLR5O60602 858 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 TROVE2P10155 538 aaKnown RBP eCLIP13.64□□□□□ -0.233e-6■■□□□ 11.8
CAPRIN1-212ENST00000532820 HNRNPH1P31943 449 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SLC10A7Q0GE19 358 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 CDH17Q12864 832 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 BNIP1Q12981 228 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 TAF1BQ53T94 588 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 SPANXN3Q5MJ09 141 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 BEND5Q7L4P6 421 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 TMEM135Q86UB9 458 aa13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-212ENST00000532820 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms