RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CCNG2Q16589 344 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF792Q3KQV3 632 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ZSWIM2Q8NEG5 633 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PSMA8Q8TAA3 256 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 HM13Q8TCT9 377 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 KBTBD7Q8WVZ9 684 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 LENG9Q96B70 501 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ARHGEF26Q96DR7 871 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SRPK1Q96SB4 655 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 KATNAL1Q9BW62 490 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 REXO4Q9GZR2 422 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 RPF1Q9H9Y2 349 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 POMPQ9Y244 141 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 UBE4BO95155 1302 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 FRMPD4Q14CM0 1322 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TLR3O15455 904 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TFAP2AP05549 437 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 MYL4P12829 197 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 FGFR3P22607 806 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC5A2P31639 672 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 GTF2H1P32780 548 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PBX3P40426 434 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CCT8P50990 548 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 KCNJ8Q15842 424 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 XRRA1Q6P2D8 792 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF354CQ86Y25 554 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SPERTQ8NA61 448 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 OR7G1Q8NGA0 311 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 KIF12Q96FN5 646 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CCSER2Q9H7U1 834 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF696Q9H7X3 374 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TOPORSQ9NS56 1045 aaPredicted RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PADI4Q9UM07 663 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 FIS1Q9Y3D6 152 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PTPRZ1P23471 2315 aaPredicted RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ASTN1O14525 1302 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CCDC88AQ3V6T2 1871 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 LAMB2P55268 1798 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 MYH1P12882 1939 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 A0A1W2PPW3 197 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC16A3O15427 465 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ZC3H11AO75152 810 aaKnown RBP eCLIP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 USP12O75317 370 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SEC24AO95486 1093 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TNNC2P02585 160 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SSTR1P30872 391 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 FMO5P49326 533 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ACLYP53396 1101 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PKNOX1P55347 436 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 RAB14P61106 215 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ECT2LQ008S8 904 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 VAC14Q08AM6 782 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 NSUN2Q08J23 767 aaKnown RBP eCLIP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP2A13Q16696 494 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 BORAQ6PGQ7 559 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC55Q6ZSA7 311 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CBWD2Q8IUF1 395 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 MYO1HQ8N1T3 1032 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TTC30BQ8N4P2 665 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SNX31Q8N9S9 440 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 FBXO36Q8NEA4 188 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PPP1R36Q96LQ0 422 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 MORF4L1Q9UBU8 362 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TLK1Q9UKI8 766 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 AGO2Q9UKV8 859 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PCDHA3Q9Y5H8 950 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 CASTOR2A6NHX0 329 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 PI4K2BG5E9Z4 385 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 PSTPIP1O43586 416 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 BMP10O95393 424 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 NADKO95544 446 aaPredicted RBP6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 RBP3P10745 1247 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 CHRNB1P11230 501 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 PRKACAP17612 351 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 RRM1P23921 792 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 OR1G1P47890 313 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 CLK2P49760 499 aaKnown RBP6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 SERPINB9P50453 376 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 ADGRE1Q14246 886 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 TLR1Q15399 786 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 TAF5Q15542 800 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 AASDHQ4L235 1098 aaPredicted RBP6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 IRF2BP2Q7Z5L9 587 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 SLFN11Q7Z7L1 901 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 CAMK1DQ8IU85 385 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 PPIL6Q8IXY8 311 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 CLEC4FQ8N1N0 589 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 SFRP1Q8N474 314 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 OR7A2PQ8NGA2 310 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 LILRB4Q8NHJ6 448 aa6.9□□□□□ -1.3
TGFBR3-209ENST00000532540 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms