RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ELMO1Q92556 727 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 EMID1Q96A84 441 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 FAR2Q96K12 515 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 PSD3Q9NYI0 1048 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SNX10Q9Y5X0 201 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 C9IYK1 514 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 PSMD12O00232 456 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ANGPT2O15123 496 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 E2F6O75461 281 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 DCTN3O75935 186 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 MAT2AP31153 395 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 CRADDP78560 199 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 DAB2P98082 770 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 MMGT1Q8N4V1 131 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 BAP1Q92560 729 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SAMD11Q96NU1 681 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SMG9Q9H0W8 520 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ABCB8Q9NUT2 735 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 WHRNQ9P202 907 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 BAZ2AQ9UIF9 1905 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 A0A0A0MRY4 1105 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 HCRTO43612 131 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 VNN1O95497 513 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 AGTP01019 485 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 MGAT5Q09328 741 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 EIF2B5Q13144 721 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SNAP47Q5SQN1 464 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 CDCA2Q69YH5 1023 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 TSTD1Q8NFU3 115 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SPATA13Q96N96 652 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 PANX3Q96QZ0 392 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ABCG8Q9H221 673 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 CATSPERZQ9NTU4 200 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 APPL1Q9UKG1 709 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 UBR2Q8IWV8 1755 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 YJEFN3A6XGL0 299 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 E7ENQ6 273 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 PITPNM1O00562 1244 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 RPN2P04844 631 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 TAS2R40P59535 323 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 DPYSL3Q14195 570 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 TAF5Q15542 800 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 OR7D4Q8NG98 312 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ZNF670Q9BS34 389 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 TUBB6Q9BUF5 446 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 FAM129AQ9BZQ8 928 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 TXLNGQ9NUQ3 528 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ADAMTS5Q9UNA0 930 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 ACOT9Q9Y305 439 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 HBS1LQ9Y450 684 aaKnown RBP8.09□□□□□ -1.11
CTNND1-230ENST00000532245 INSL5Q9Y5Q6 135 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 SLX4Q8IY92 1834 aa8.09□□□□□ -1.11
CTNND1-230ENST00000532245 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 SLC25A14O95258 325 aaPredicted RBP8.09□□□□□ -1.12
CTNND1-230ENST00000532245 MUM1Q2TAK8 710 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 LVRNQ6Q4G3 990 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 RNF19BQ6ZMZ0 732 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 MTSS1LQ765P7 747 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 RRM2BQ7LG56 351 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 STRADAQ7RTN6 431 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 PSTKQ8IV42 348 aaKnown RBP8.09□□□□□ -1.12
CTNND1-230ENST00000532245 SH2D3CQ8N5H7 860 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 FBXO25Q8TCJ0 367 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 CLEC4CQ8WTT0 213 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 PLD4Q96BZ4 506 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 CCSER2Q9H7U1 834 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 ACTR8Q9H981 624 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 PHF24Q9UPV7 400 aa8.09□□□□□ -1.12
CTNND1-230ENST00000532245 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.12
CTNND1-230ENST00000532245 SYCE1LA8MT33 242 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 KCNU1A8MYU2 1149 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 SKAP2O75563 359 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-230ENST00000532245 PGAM1P18669 254 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 TNNI3P19429 210 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 DAOAP59103 153 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 CHI3L2Q15782 390 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 MEA1Q16626 185 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 GALNTL6Q49A17 601 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 ANKS1BQ7Z6G8 1248 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 LCA5Q86VQ0 697 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 MCOLN3Q8TDD5 553 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 SHDQ96IW2 340 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 FAM111AQ96PZ2 611 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 KXD1Q9BQD3 176 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 TRIM15Q9C019 465 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 RAD18Q9NS91 495 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 ETNK2Q9NVF9 386 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 FGFR1OP2Q9NVK5 253 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 RIC8BQ9NVN3 520 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 TAS2R13Q9NYV9 303 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 COL22A1Q8NFW1 1626 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-230ENST00000532245 A0A1B0GVM2 712 aa8.08□□□□□ -1.12
CTNND1-230ENST00000532245 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms