RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PIAS2O75928 621 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ENDOD1O94919 500 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 WISP1O95388 367 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 PAEPP09466 180 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 CKMT1AP12532 417 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 TBXAS1P24557 533 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ERVPABLB-1P60509 514 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ENPEPQ07075 957 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 DPYDQ12882 1025 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ZNF177Q13360 481 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-206ENST00000531430 SLC12A1Q13621 1099 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 CDKN3Q16667 212 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 OR6B2Q6IFH4 312 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC81Q6ZN84 652 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 Q6ZSR6 202 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 Q6ZVU0 165 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 RRAGAQ7L523 313 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 SCML4Q8N228 414 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 KAT5Q92993 513 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ARRDC3Q96B67 414 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 WBP1Q96G27 269 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ATXN7L3BQ96GX2 97 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 SLC39A13Q96H72 371 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 HIC2Q96JB3 615 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 RPRD1AQ96P16 312 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-206ENST00000531430 NT5C1BQ96P26 610 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 NOX5Q96PH1 765 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 DPH1Q9BZG8 443 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 FAM204AQ9H8W3 233 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 42.9
NEDD8-206ENST00000531430 ARMCX3Q9UH62 379 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-206ENST00000531430 VPS28Q9UK41 221 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 PPM1HQ9ULR3 514 aa9.5□□□□□ -0.89
NEDD8-206ENST00000531430 ATMQ13315 3056 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 HECTD1Q9ULT8 2610 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 KCNU1A8MYU2 1149 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 K7ESM1 405 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 AGRPO00253 132 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 TRUB2O95900 331 aaKnown RBP9.49□□□□□ -0.89
NEDD8-206ENST00000531430 PAK4O96013 591 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-206ENST00000531430 KRT5P13647 590 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 DNA2P51530 1060 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 OXCT1P55809 520 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC15Q0P6D6 951 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 NFATC3Q12968 1075 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 PKP1Q13835 747 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ISXQ2M1V0 245 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 EDRF1Q3B7T1 1238 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 AGBL4Q5VU57 503 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ANKRD40Q6AI12 368 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
NEDD8-206ENST00000531430 PTAR1Q7Z6K3 402 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-206ENST00000531430 TRIM69Q86WT6 500 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 LMX1AQ8TE12 382 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 FRS2Q8WU20 508 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ERCC4Q92889 916 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-206ENST00000531430 MED8Q96G25 268 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 BTN2A3PQ96KV6 586 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ZSWIM1Q9BR11 485 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 ARHGAP9Q9BRR9 750 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 SIK2Q9H0K1 926 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 PREBQ9HCU5 417 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 VANGL2Q9ULK5 521 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 MYO18BQ8IUG5 2567 aa9.49□□□□□ -0.89
NEDD8-206ENST00000531430 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 MCF2LO15068 1137 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 SCAMP1O15126 338 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 MUSKO15146 869 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 SART1O43290 800 aaKnown RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 TNFSF15O95150 251 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 TGM2P21980 687 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 HNRNPA2B1P22626 353 aaKnown RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CHRNA3P32297 505 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 GGCXP38435 758 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 PRCPP42785 496 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 ACADSBP45954 432 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 RECQLP46063 649 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 TAS2R38P59533 333 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 YWHAZP63104 245 aaKnown RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 PITX1P78337 314 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CDK17Q00537 523 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 FKBP3Q00688 224 aaKnown RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CENPCQ03188 943 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CETN1Q12798 172 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 NME3Q13232 169 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 STILQ15468 1287 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 ZNF284Q2VY69 593 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 DEFB133Q30KQ1 61 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC40Q4G0X9 1142 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms