RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNF783Q6ZMS7 281 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 USP33Q8TEY7 942 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 ALG14Q96F25 216 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 LMLNQ96KR4 655 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 CEP41Q9BYV8 373 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 SLC2A11Q9BYW1 496 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 DEC1Q9P2X7 70 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 GGA2Q9UJY4 613 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 DRG1Q9Y295 367 aaKnown RBP19.47■□□□□ 0.71
SMPD1-205ENST00000531303 OR51B4Q9Y5P0 310 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 MYO18AQ92614 2054 aaKnown RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 BCLAF3A2AJT9 711 aaKnown RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 KDELR3O43731 214 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ITGAVP06756 1048 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 PABPC1P11940 636 aaKnown RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ETS1P14921 441 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 GDF10P55107 478 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 DR1Q01658 176 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 TRIP13Q15645 432 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 PLEKHG6Q3KR16 790 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 PITRM1Q5JRX3 1037 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 GRAMD4Q6IC98 578 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 LINGO4Q6UY18 593 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ADHFE1Q8IWW8 467 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ETFBKMTQ8IXQ9 262 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ZNF557Q8N988 423 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 HTR3CQ8WXA8 447 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 TSGA13Q96PP4 275 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 BRD8Q9H0E9 1235 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 USP29Q9HBJ7 922 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 INTS6Q9UL03 887 aaKnown RBP19.46■□□□□ 0.71
SMPD1-205ENST00000531303 ACTL7AQ9Y615 435 aa19.46■□□□□ 0.71
SMPD1-205ENST00000531303 COL4A3Q01955 1670 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 TTI1O43156 1089 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 ECEL1O95672 775 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 CISD3P0C7P0 127 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 ZSCAN5DPP0CG00 497 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 CCNCP24863 283 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 CLCN6P51797 869 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 ZP2Q05996 745 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 MESP2Q0VG99 397 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 FUT11Q495W5 492 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 TEX35Q5T0J7 233 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 LRRC49Q8IUZ0 686 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 MMGT1Q8N4V1 131 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 HINFPQ9BQA5 517 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 ACE2Q9BYF1 805 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-205ENST00000531303 VPS51Q9UID3 782 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 FBXO10Q9UK96 956 aa19.45■□□□□ 0.7
SMPD1-205ENST00000531303 RAD51CO43502 376 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 PRAMEF11O60813 436 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 JCHAINP01591 159 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 OPRD1P41143 372 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 PTGIRP43119 386 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 VPS41P49754 854 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 LMNB2Q03252 620 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 IL10RBQ08334 325 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 TDGQ13569 410 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 PPP1R7Q15435 360 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 GEN1Q17RS7 908 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 TIGD7Q6NT04 549 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-205ENST00000531303 C8orf74Q6P047 294 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 TAB3Q8N5C8 712 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-205ENST00000531303 ALLCQ8N6M5 410 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 CCDC89Q8N998 374 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 GLIS1Q8NBF1 620 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 CCDC26Q8TAB7 109 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 GRK7Q8WTQ7 553 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 FERMT1Q9BQL6 677 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 LRRC1Q9BTT6 524 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 PCYOX1Q9UHG3 505 aa19.44■□□□□ 0.7
SMPD1-205ENST00000531303 CFAP69A5D8W1 941 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 RNF103O00237 685 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 MATN3O15232 486 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 KRT14P02533 472 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 CCNB1P14635 433 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 CTSOP43234 321 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 ARF5P84085 180 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 SLC7A5Q01650 507 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 SLC12A1Q13621 1099 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 DCAF4L2Q8NA75 395 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 CCDC110Q8TBZ0 833 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 NSMCE1Q8WV22 266 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 CHFRQ96EP1 664 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 RUNDC3BQ96NL0 473 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 TRIM51Q9BSJ1 452 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 C2orf49Q9BVC5 232 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 HEBP1Q9NRV9 189 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 UBA2Q9UBT2 640 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 PRKAG3Q9UGI9 489 aa19.43■□□□□ 0.7
SMPD1-205ENST00000531303 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 FEZ2Q9UHY8 353 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 V9GYY5 206 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-205ENST00000531303 F5H423 210 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-205ENST00000531303 ZMPSTE24O75844 475 aa19.42■□□□□ 0.7
SMPD1-205ENST00000531303 NEBLO76041 1014 aa19.42■□□□□ 0.7
SMPD1-205ENST00000531303 GAS8O95995 478 aa19.42■□□□□ 0.7
SMPD1-205ENST00000531303 RHOXF2BP0C7M4 288 aa19.42■□□□□ 0.7
SMPD1-205ENST00000531303 POLR2EP19388 210 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms