RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 AGBL4Q5VU57 503 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
CD44-232ENST00000531118 MFN1Q8IWA4 741 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 SLC22A18ASQ8N1D0 253 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 CRYBG2Q8N1P7 616 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 STK40Q8N2I9 435 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 KDM1BQ8NB78 822 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 OR13H1Q8NG92 308 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 TTC17Q96AE7 1141 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 LMLNQ96KR4 655 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 TWNKQ96RR1 684 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 FAM129BQ96TA1 746 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 CALN1Q9BXU9 219 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 SYNDIG1Q9H7V2 258 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 KIAA1586Q9HCI6 787 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 ANAPC2Q9UJX6 822 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 INTS6Q9UL03 887 aaKnown RBP8.51□□□□□ -1.05
CD44-232ENST00000531118 PLAAQ9Y263 795 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 UNC13CQ8NB66 2214 aa8.51□□□□□ -1.05
CD44-232ENST00000531118 ZNF106Q9H2Y7 1883 aaKnown RBP8.51□□□□□ -1.05
CD44-232ENST00000531118 TARSL2A2RTX5 802 aaKnown RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 EME2A4GXA9 379 aaPredicted RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 NEMP2A6NFY4 417 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 LCE2BO14633 110 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 STX6O43752 255 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 TBL1XO60907 577 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 PHACTR2O75167 634 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 IL1BP01584 269 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 PRLRP16471 622 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 UGT1A5P35504 534 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 ASPAP45381 313 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 CYP2J2P51589 502 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 POLE2P56282 527 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 CBLBQ13191 982 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 KCNAB2Q13303 367 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 EIF3IQ13347 325 aaKnown RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 SPIDRQ14159 915 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ELAVL3Q14576 367 aaKnown RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 GCNT7Q6ZNI0 430 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 B3GNT8Q7Z7M8 397 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 UNC93AQ86WB7 457 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ARHGAP18Q8N392 663 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 ZSCAN1Q8NBB4 408 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 MIB2Q96AX9 1013 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 TMA16Q96EY4 203 aaKnown RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 PRICKLE1Q96MT3 831 aaPredicted RBP8.5□□□□□ -1.05
CD44-232ENST00000531118 EPB41L5Q9HCM4 733 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 FZD3Q9NPG1 666 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ATP13A2Q9NQ11 1180 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 AGPAT3Q9NRZ7 376 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 NCKIPSDQ9NZQ3 722 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ERVW-1Q9UQF0 538 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
CD44-232ENST00000531118 LRP4O75096 1905 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 MSI1O43347 362 aaKnown RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 RNGTTO60942 597 aaKnown RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 KIF20AO95235 890 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 VNN1O95497 513 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 SRPRAP08240 638 aaKnown RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 HGFP14210 728 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 SCTRP47872 440 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 CASP4P49662 377 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 HNRNPKP61978 463 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD44-232ENST00000531118 YWHAGP61981 247 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD44-232ENST00000531118 INCA1Q0VD86 236 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 NCOA4Q13772 614 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 ESPL1Q14674 2120 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 NR0B2Q15466 257 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 ZNF542PQ5EBM4 170 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PITRM1Q5JRX3 1037 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 MPP7Q5T2T1 576 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 ADGRF1Q5T601 910 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 RFWD3Q6PCD5 774 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 BORAQ6PGQ7 559 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PTAR1Q7Z6K3 402 aaPredicted RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 DSG4Q86SJ6 1040 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 FBXO39Q8N4B4 442 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 HJURPQ8NCD3 748 aaPredicted RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 WDR48Q8TAF3 677 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PLEKHO2Q8TD55 490 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 NOX5Q96PH1 765 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PREBQ9HCU5 417 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 GPR27Q9NS67 375 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 OLA1Q9NTK5 396 aaKnown RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 DNAJC28Q9NX36 388 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 SEPT10Q9P0V9 454 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 PISDQ9UG56 409 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 TUBD1Q9UJT1 453 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 LIMCH1Q9UPQ0 1083 aa8.49□□□□□ -1.05
CD44-232ENST00000531118 HBS1LQ9Y450 684 aaKnown RBP8.49□□□□□ -1.05
CD44-232ENST00000531118 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms