RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
LTBP3-219ENST00000530990 BAG1Q99933 345 aaPredicted RBP12.16□□□□□ -0.46
LTBP3-219ENST00000530990 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 NOL6Q9H6R4 1146 aaKnown RBP12.16□□□□□ -0.46
LTBP3-219ENST00000530990 PRDM16Q9HAZ2 1276 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
LTBP3-219ENST00000530990 K7ERQ8 282 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 ATP9BO43861 1147 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 ZMPSTE24O75844 475 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 MT-CO1P00395 513 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 SRCP12931 536 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 MAN1A1P33908 653 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 ETFBP38117 255 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 NNMTP40261 264 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 TAS2R40P59535 323 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 DPYSQ14117 519 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 POLD3Q15054 466 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 SPA17Q15506 151 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 HADHQ16836 314 aaKnown RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 PLK5Q496M5 336 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 BOLA3Q53S33 107 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 Q6ZVU0 165 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 PRCCQ92733 491 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 PTPRN2Q92932 1015 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 SIPA1Q96FS4 1042 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 SPACA7Q96KW9 195 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 ACE2Q9BYF1 805 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 FBRSQ9HAH7 460 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 CWC15Q9P013 229 aaKnown RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 USP36Q9P275 1121 aaKnown RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 SUN2Q9UH99 717 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 MBD1Q9UIS9 605 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 CYP8B1Q9UNU6 501 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 REXO2Q9Y3B8 237 aaKnown RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.46
LTBP3-219ENST00000530990 EPN1Q9Y6I3 576 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-219ENST00000530990 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 IGHV1OR15-9A0A0B4J2B8 117 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 H3BRJ5 948 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ERCC2P18074 760 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ARL4AP40617 200 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 CDH6P55285 790 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 RPS14P62263 151 aaKnown RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 TCEAL1Q15170 157 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 DLG2Q15700 870 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ACCSLQ4AC99 568 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ATP13A4Q4VNC1 1196 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 PMS2CLQ68D20 193 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF776Q68DI1 518 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 RETSATQ6NUM9 610 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 C22orf39Q6P5X5 142 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 POLNQ7Z5Q5 900 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 UMODL1-AS1Q8N2C9 162 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 STK40Q8N2I9 435 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 NPWQ8N729 165 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ATP11CQ8NB49 1132 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 NETO2Q8NC67 525 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 HMCESQ96FZ2 354 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 CELF6Q96J87 481 aaKnown RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 KLC2Q9H0B6 622 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 RSPH9Q9H1X1 276 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-219ENST00000530990 GRPEL1Q9HAV7 217 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 RAB23Q9ULC3 237 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 MFHAS1Q9Y4C4 1052 aa12.14□□□□□ -0.47
LTBP3-219ENST00000530990 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 RASA4BC9J798 803 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 DAPK3O43293 454 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 RASA4O43374 803 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 BNIP3LO60238 219 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF217O75362 1048 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 IPO7O95373 1038 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 CD160O95971 181 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 CD48P09326 243 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 C7P10643 843 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ACADMP11310 421 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ARHGAP25P42331 645 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 PSMD8P48556 350 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 HCAR3P49019 387 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 TPMTP51580 245 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ARSEP51690 589 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 CLCN6P51797 869 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF135P52742 658 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms