RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 MAN2B2Q9Y2E5 1009 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 EYA2O00167 538 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 FCHO1O14526 889 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 TP73O15350 636 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 TLR2O60603 784 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 BCAR3O75815 825 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 NDST3O95803 873 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 HARSP12081 509 aaKnown RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 TNFSF4P23510 183 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 GABRB3P28472 473 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 PPIL2Q13356 520 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 DNASE1L3Q13609 305 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 PMS2P11Q13670 270 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ETFDHQ16134 617 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ARL13BQ3SXY8 428 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 AASDHQ4L235 1098 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 FAM209BQ5JX69 171 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 RAP1GAP2Q684P5 730 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 VSTM1Q6UX27 236 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 CCDC28AQ8IWP9 274 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 PARD3BQ8TEW8 1205 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ABHD5Q8WTS1 349 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ZKSCAN4Q969J2 545 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 RPL36ALQ969Q0 106 aaKnown RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ZNF333Q96JL9 665 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 WDR24Q96S15 920 aa7.88□□□□□ -1.15
CSDE1-213ENST00000530784 ZMYND8Q9ULU4 1186 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 RBBP6Q7Z6E9 1792 aaKnown RBP7.88□□□□□ -1.15
CSDE1-213ENST00000530784 HTTP42858 3142 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 CCNT2O60583 730 aaKnown RBP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 CBFA2T3O75081 653 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 ATP5F1P24539 256 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 MST1P26927 711 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 RFX5P48382 616 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 PPATQ06203 517 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 CCDC15Q0P6D6 951 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 SLC14A1Q13336 389 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 SLC4A8Q2Y0W8 1093 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 ALDH1L2Q3SY69 923 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 MRNIPQ6NTE8 343 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 DPP9Q86TI2 863 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 TXLNBQ8N3L3 684 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-213ENST00000530784 FAM151AQ8WW52 585 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 SNX27Q96L92 541 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 GDF15Q99988 308 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 FAM118BQ9BPY3 351 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 PCDHAC1Q9H158 963 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 SMC4Q9NTJ3 1288 aa7.87□□□□□ -1.15
CSDE1-213ENST00000530784 DSCR3O14972 297 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 CIAO1O76071 339 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 MBPP02686 304 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 UBTFL1P0CB47 393 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 TMIGD3P0DMS9 266 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 GALNSP34059 522 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 TCP10Q12799 353 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 C11orf87Q6NUJ2 197 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 CDC42EP5Q6NZY7 148 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 ATG9AQ7Z3C6 839 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 C11orf96Q7Z7L8 435 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 ANKRD23Q86SG2 305 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 RIPOR3Q96MK2 946 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 CINPQ9BW66 212 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-213ENST00000530784 ARHGAP39Q9C0H5 1083 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 SIL1Q9H173 461 aa7.86□□□□□ -1.15
CSDE1-213ENST00000530784 SALL1Q9NSC2 1324 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 PDHXO00330 501 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 RNF8O76064 485 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 PRMT2P55345 433 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 KCNJ12Q14500 433 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 TMTC4Q5T4D3 741 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 PAPD7Q5XG87 772 aaKnown RBP7.85□□□□□ -1.15
CSDE1-213ENST00000530784 IL31Q6EBC2 164 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-213ENST00000530784 GLIS1Q8NBF1 620 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 MAP4K1Q92918 833 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 ARNT2Q9HBZ2 717 aa7.85□□□□□ -1.15
CSDE1-213ENST00000530784 RASA4BC9J798 803 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 RASA4O43374 803 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 FGF18O76093 207 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 PECAM1P16284 738 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 DRD1P21728 446 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 SLC5A2P31639 672 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 IL15P40933 162 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 DGKQP52824 942 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 TBX4P57082 545 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 SLC35G1Q2M3R5 365 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 ARHGAP15Q53QZ3 475 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 C17orf99Q6UX52 265 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 DZIP1Q86YF9 867 aaKnown RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 DENND1AQ8TEH3 1009 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 SCARB1Q8WTV0 552 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms