RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TTC30BQ8N4P2 665 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 PAQR4Q8N4S7 273 aaPredicted RBP6.37□□□□□ -1.39
PCF11-202ENST00000528336 PTGR2Q8N8N7 351 aaPredicted RBP6.37□□□□□ -1.39
PCF11-202ENST00000528336 FAM110DQ8TAY7 271 aaPredicted RBP6.37□□□□□ -1.39
PCF11-202ENST00000528336 COQ8BQ96D53 544 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 ISCA1Q9BUE6 129 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 TUBB6Q9BUF5 446 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 TRIM31Q9BZY9 425 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 TXNRD2Q9NNW7 524 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 PAPOLBQ9NRJ5 636 aaKnown RBP6.37□□□□□ -1.39
PCF11-202ENST00000528336 ARL15Q9NXU5 204 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.37□□□□□ -1.39
PCF11-202ENST00000528336 SLC45A1Q9Y2W3 748 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 DGKBQ9Y6T7 804 aa6.37□□□□□ -1.39
PCF11-202ENST00000528336 IQGAP2Q13576 1575 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 ARHGEF11O15085 1522 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 ZMYM2Q9UBW7 1377 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 SEPT4O43236 478 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 MSI1O43347 362 aaKnown RBP6.36□□□□□ -1.39
PCF11-202ENST00000528336 TK1P04183 234 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 ACP5P13686 325 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 TERF1P54274 439 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 ACTR2P61160 394 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 CDC37Q16543 378 aaPredicted RBP6.36□□□□□ -1.39
PCF11-202ENST00000528336 ZNF484Q5JVG2 852 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 KIAA1755Q5JYT7 1200 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 MTFR2Q6P444 385 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 SLC30A9Q6PML9 568 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 LRIG3Q6UXM1 1119 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 CYB5R4Q7L1T6 521 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 RTL10Q7L3V2 364 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 RNF144BQ7Z419 303 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 C2CD5Q86YS7 1000 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 IL17REQ8NFR9 667 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 LINS1Q8NG48 757 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 KAT2AQ92830 837 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 SDCCAG3Q96C92 435 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 KTI12Q96EK9 354 aaPredicted RBP6.36□□□□□ -1.39
PCF11-202ENST00000528336 HERC2P3Q9BVR0 1158 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 TWSG1Q9GZX9 223 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 ALDH8A1Q9H2A2 487 aaPredicted RBP6.36□□□□□ -1.39
PCF11-202ENST00000528336 ELOVL5Q9NYP7 299 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 LAMP3Q9UQV4 416 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 DTX4Q9Y2E6 619 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 GPR52Q9Y2T5 361 aa6.36□□□□□ -1.39
PCF11-202ENST00000528336 PRG4Q92954 1404 aaPredicted RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 TCRBV7S3A2A0A539 114 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 NPIPB13A6NJU9 1138 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 NPIPB5A8MRT5 1133 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 NPIPB4C9JG80 1138 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 STX16-NPEPL1H3BU86 382 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 RHODO00212 210 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 STX16O14662 325 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 PPEF2O14830 753 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 SYN3O14994 580 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 FGBP02675 491 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 PRF1P14222 555 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 PKMP14618 531 aaKnown RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 HOXB9P17482 250 aaPredicted RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 DDX10Q13206 875 aaKnown RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 MTX1Q13505 466 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 GALNT3Q14435 633 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 JAKMIP3Q5VZ66 844 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 C11orf87Q6NUJ2 197 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 KLBQ86Z14 1044 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 TMEM57Q8N5G2 664 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 CEP70Q8NHQ1 597 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 RBM17Q96I25 401 aaKnown RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 COG8Q96MW5 612 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 RETREG1Q9H6L5 497 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 ACAD9Q9H845 621 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 SAGE1Q9NXZ1 904 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 HEY2Q9UBP5 337 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 KLQ9UEF7 1012 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 DERAQ9Y315 318 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 PKP3Q9Y446 797 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.35□□□□□ -1.39
PCF11-202ENST00000528336 UGGT2Q9NYU1 1516 aa6.35□□□□□ -1.39
PCF11-202ENST00000528336 TRBV5-3A0A0A0MS03 114 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 A0A1W2PPC1 479 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 KCNJ18B7U540 433 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 PRPF4O43172 522 aaKnown RBP eCLIP6.34□□□□□ -1.39
PCF11-202ENST00000528336 WNT1P04628 370 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 RPN1P04843 607 aaKnown RBP6.34□□□□□ -1.39
PCF11-202ENST00000528336 CSF1P09603 554 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 GSTM2P28161 218 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 AVPR2P30518 371 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 ZBTB16Q05516 673 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 PPFIA1Q13136 1202 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 BIRC3Q13489 604 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 FAM133BQ5BKY9 247 aaKnown RBP6.34□□□□□ -1.39
PCF11-202ENST00000528336 ZNF425Q6IV72 752 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 C16orf54Q6UWD8 224 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 TMEM217Q8N7C4 229 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 EME1Q96AY2 570 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 ZSCAN31Q96LW9 406 aaPredicted RBP6.34□□□□□ -1.39
PCF11-202ENST00000528336 TBATAQ96M53 351 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms