RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ASLP04424 464 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 GOT1P17174 413 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SLC6A4P31645 630 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SLC8A1P32418 973 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 NUDT1P36639 197 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 ANP32AP39687 249 aaKnown RBP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 BPIFB4P59827 614 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 MTA1Q13330 715 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 PDCLQ13371 301 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 ARHGAP44Q17R89 818 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 HNRNPA1L2Q32P51 320 aaKnown RBP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 DPCR1Q3MIW9 517 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 MIIPQ5JXC2 388 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SYPL2Q5VXT5 272 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 NADSYN1Q6IA69 706 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 NAPEPLDQ6IQ20 393 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 DPY19L2P1Q6NXN4 242 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 RFWD3Q6PCD5 774 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 KANSL1Q7Z3B3 1105 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 PRPF39Q86UA1 669 aaKnown RBP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 IQCHQ86VS3 1027 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 MMAAQ8IVH4 418 aaKnown RBP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 OR14C36Q8NHC7 312 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 LMLNQ96KR4 655 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 ABCG4Q9H172 646 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 LMBRD1Q9NUN5 540 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 EVA1BQ9NVM1 165 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 DNAJC12Q9UKB3 198 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3DA0A087WVF3 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3IA0A087WXS9 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3EA0A087X179 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3KA0A087X1G2 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 GOLGA6L7A0A1B0GV03 622 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TARSL2A2RTX5 802 aaKnown RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TYW5A2RUC4 315 aaKnown RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3FA6NER0 549 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3LB9A6J9 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 K7ENP7 123 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 WNT9AO14904 365 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 OPA1O60313 960 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 SIN3BO75182 1162 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 ADH1BP00325 375 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3HP0C7X1 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 SLC2A3P11169 496 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 RBMS1P29558 406 aaKnown RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 CLCN1P35523 988 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 KRT9P35527 623 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 USP8P40818 1118 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 SGSHP51688 502 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 ADPRHP54922 357 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 STAT4Q14765 748 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 MS4A13Q5J8X5 152 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3GQ6DHY5 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3CQ6IPX1 549 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 INO80CQ6PI98 192 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TBC1D3Q8IZP1 549 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 KDM1BQ8NB78 822 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 HJURPQ8NCD3 748 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TTC17Q96AE7 1141 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 VCPIP1Q96JH7 1222 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 PPP1R13BQ96KQ4 1090 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 MTG2Q9H4K7 406 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TMEM51Q9NW97 253 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 SLC12A6Q9UHW9 1150 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 DMTF1Q9Y222 760 aa10.84□□□□□ -0.67
CPSF1-203ENST00000527916 TRIM38O00635 465 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 LATO43561 262 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 HSF2BPO75031 334 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 SDC3O75056 442 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 CSO75390 466 aaKnown RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 TRUB2O95900 331 aaKnown RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 APOEP02649 317 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 GP1BAP07359 652 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 ALPPL2P10696 532 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 C5AR1P21730 350 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 PSMD8P48556 350 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 CDK17Q00537 523 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 APBA1Q02410 837 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 KCNMA1Q12791 1236 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 NFATC3Q12968 1075 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 TCP11X2Q5H9J9 407 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 CDCP2Q5VXM1 449 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 KIAA1614Q5VZ46 1190 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 IGF2-ASQ6U949 168 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 XKR5Q6UX68 686 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 CCDC81Q6ZN84 652 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 TAC4Q86UU9 113 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 SPATS2Q86XZ4 545 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms