RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 VPS51Q9UID3 782 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 MYO6Q9UM54 1294 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-213ENST00000527897 PCDH15Q96QU1 1955 aa15.93■□□□□ 0.14
CAPN1-213ENST00000527897 IGLV3-10A0A075B6K4 115 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 A0A1W2PQC6 194 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 SIGLEC16A6NMB1 481 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 K7ERQ8 282 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 PLK4O00444 970 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 CCP110O43303 1012 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 ATMINO43313 823 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-213ENST00000527897 ATP9BO43861 1147 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 MT-CO1P00395 513 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 SRCP12931 536 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 GLDCP23378 1020 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 METAP1P53582 386 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 GSCP56915 257 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-213ENST00000527897 RPL7AP62424 266 aaKnown RBP15.92■□□□□ 0.14
CAPN1-213ENST00000527897 FANCCQ00597 558 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 KLHL30Q0D2K2 578 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 GRIK2Q13002 908 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 N4BP2L1Q5TBK1 243 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-213ENST00000527897 NCEH1Q6PIU2 408 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-213ENST00000527897 DSG4Q86SJ6 1040 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 MCOLN2Q8IZK6 566 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 AADATQ8N5Z0 425 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 OR14C36Q8NHC7 312 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 PCED1AQ9H1Q7 454 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 HAUS4Q9H6D7 363 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 SLCO1B1Q9Y6L6 691 aa15.92■□□□□ 0.14
CAPN1-213ENST00000527897 A0A1B0GVT2 93 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 LRRC72A6NJI9 287 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 FAM72CH0Y354 149 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 PLEKP08567 350 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 ADRB1P08588 477 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 SKILP12757 684 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 DESP17661 470 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 C5AR1P21730 350 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 CSNK1EP49674 416 aaKnown RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 GALCP54803 685 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 UBASH3AP57075 661 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 NR1I3Q14994 352 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 ZSCAN23Q3MJ62 389 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 FAM72AQ5TYM5 149 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 KIAA0895LQ68EN5 471 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 FAM72DQ6L9T8 149 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 LAYNQ6UX15 382 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 ADAT2Q7Z6V5 191 aaKnown RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 FAM72BQ86X60 149 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 ZNF354CQ86Y25 554 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 DCAF4L2Q8NA75 395 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 CENPIQ92674 756 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D31Q96DN5 1066 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 TNKS2Q9H2K2 1166 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 ATP13A1Q9HD20 1204 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 DNAI1Q9UI46 699 aa15.91■□□□□ 0.14
CAPN1-213ENST00000527897 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-213ENST00000527897 CACNA1EQ15878 2313 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3DA0A087WVF3 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3IA0A087WXS9 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3EA0A087X179 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3KA0A087X1G2 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 ILVBLA1L0T0 632 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3FA6NER0 549 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3LB9A6J9 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 C1QTNF3-AMACRE9PGA6 284 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3HP0C7X1 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 GOT1P17174 413 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 DNA2P51530 1060 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 ZNF143P52747 638 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 GNA12Q03113 381 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TDRD12Q587J7 1177 aaKnown RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 EFHC2Q5JST6 749 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 FAM46CQ5VWP2 391 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3GQ6DHY5 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3CQ6IPX1 549 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 ZNF571Q7Z3V5 609 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 SLFN11Q7Z7L1 901 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TBC1D3Q8IZP1 549 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 PYROXD2Q8N2H3 581 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 PIP4K2CQ8TBX8 421 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 CPLX3Q8WVH0 158 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 CCDC114Q96M63 670 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 OSBPL2Q9H1P3 480 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 SLC32A1Q9H598 525 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 TM9SF3Q9HD45 589 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 PPARGC1AQ9UBK2 798 aaKnown RBP15.9■□□□□ 0.14
CAPN1-213ENST00000527897 SARDHQ9UL12 918 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 FZD4Q9ULV1 537 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 HS3ST2Q9Y278 367 aa15.9■□□□□ 0.14
CAPN1-213ENST00000527897 PLXNA2O75051 1894 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 TCRBV5S1A1TA0A578 114 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 SMAD6O43541 496 aaKnown RBP15.89■□□□□ 0.13
CAPN1-213ENST00000527897 CREB3O43889 395 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 LRIG2O94898 1065 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 C7P10643 843 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 CD27P26842 260 aa15.89■□□□□ 0.13
CAPN1-213ENST00000527897 DRD3P35462 400 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms