RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TFAP2DQ7Z6R9 452 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 NEK11Q8NG66 645 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 OR7D4Q8NG98 312 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 OR2T34Q8NGX1 318 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC6A18Q96N87 628 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 HAPLN3Q96S86 360 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 OMDQ99983 421 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC32A1Q9H598 525 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 NYNRINQ9P2P1 1898 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 VPS51Q9UID3 782 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 FZD4Q9ULV1 537 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 ANKRD6Q9Y2G4 727 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 DOCK9Q9BZ29 2069 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 DOCK4Q8N1I0 1966 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM72CH0Y354 149 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 H0Y8X5 98 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 MCF2LO15068 1137 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 RTN2O75298 545 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ZNF821O75541 412 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ZMPSTE24O75844 475 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ADH1BP00325 375 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 CTSLP07711 333 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 RRM1P23921 792 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 RFC1P35251 1148 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ADRA1BP35368 520 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 NNMTP40261 264 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 GRIA4P48058 902 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ADPRHP54922 357 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 PPP2CBP62714 309 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 PPP2CAP67775 309 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 POM121L1PQ3SYA9 428 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ACCSLQ4AC99 568 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ANO6Q4KMQ2 910 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM72AQ5TYM5 149 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 MANEALQ5VSG8 457 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM72DQ6L9T8 149 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 TRIM72Q6ZMU5 477 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 IRF2BP2Q7Z5L9 587 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 SETD3Q86TU7 594 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 FAM72BQ86X60 149 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 PHF13Q86YI8 300 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 NAXDQ8IW45 347 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 OR14C36Q8NHC7 312 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 CENPIQ92674 756 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 AGPAT1Q99943 283 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 SYT11Q9BT88 431 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 TM7SF3Q9NS93 570 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 NDFIP2Q9NV92 336 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 SLC25A13Q9UJS0 675 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 NEU3Q9UQ49 428 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 HS3ST2Q9Y278 367 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 DAAM1Q9Y4D1 1078 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 ACTL7AQ9Y615 435 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
PRPF40B-204ENST00000527253 A0A1W2PR77 199 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 LRRC72A6NJI9 287 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 C1QTNF9BB2RNN3 333 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 BNIP3LO60238 219 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CD160O95971 181 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 C1QTNF9P0C862 333 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 ZNF883P0CG24 379 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 OR1E1P30953 314 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CTSKP43235 329 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PTPN9P43378 593 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CCR5P51681 352 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 HDAC4P56524 1084 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 GSCP56915 257 aaPredicted RBP10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 TAS2R38P59533 333 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CNTN1Q12860 1018 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CDO1Q16878 200 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 ZNF423Q2M1K9 1284 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PRAMEF14Q5SWL7 426 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 AGBL4Q5VU57 503 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 WDR59Q6PJI9 974 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 IL27RAQ6UWB1 636 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 LRRC31Q6UY01 552 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 MON1BQ7L1V2 547 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 SLCO6A1Q86UG4 719 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 DCAF4L2Q8NA75 395 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 ANKRD20A12PQ8NF67 263 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 OR2A12Q8NGT7 310 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 BAHD1Q8TBE0 780 aaPredicted RBP10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 PIP4K2CQ8TBX8 421 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 OR8D1Q8WZ84 308 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 BAP1Q92560 729 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 FUCA2Q9BTY2 467 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
PRPF40B-204ENST00000527253 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms