RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 SERINC3Q13530 473 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 OTUD1Q5VV17 481 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 EDEM1Q92611 657 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 NT5C3BQ969T7 300 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 ERLEC1Q96DZ1 483 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 SLITRK1Q96PX8 696 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 SLC2A13Q96QE2 648 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
NEDD8-204ENST00000526430 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 CLCA2Q9UQC9 943 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 NAALADL1Q9UQQ1 740 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
NEDD8-204ENST00000526430 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RTN2O75298 545 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 FBXO21O94952 628 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 LCA5LO95447 670 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 C7P10643 843 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RARGP13631 454 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 TFE3P19532 575 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RRM1P23921 792 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 TUBP50607 506 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ERVPABLB-1P60509 514 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 HECTD3Q5T447 861 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 OR6B2Q6IFH4 312 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ALKBH5Q6P6C2 394 aaKnown RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ATG14Q6ZNE5 492 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 BEND5Q7L4P6 421 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 TMPRSS6Q8IU80 811 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 LSMEM2Q8N112 164 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 PDZD8Q8NEN9 1154 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 PRCCQ92733 491 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 P2RY11Q96G91 374 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ASNSD1Q9NWL6 643 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 REXO2Q9Y3B8 237 aaKnown RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 SH3BP1Q9Y3L3 701 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ABCA12Q86UK0 2595 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
NEDD8-204ENST00000526430 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 KIF26BQ2KJY2 2108 aa11.29□□□□□ -0.6
NEDD8-204ENST00000526430 COL27A1Q8IZC6 1860 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-204ENST00000526430 K7ENP7 123 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 CBX4O00257 560 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 KCNK3O14649 394 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 YKT6O15498 198 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 TLR5O60602 858 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 GRAP2O75791 330 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 ABL1P00519 1130 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 IGLV3-25P01717 112 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 LTFP02788 710 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 KLKB1P03952 638 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 TYRP14679 529 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 CD27P26842 260 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 FLT3P36888 993 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 SCNN1AP37088 669 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 PSEN1P49768 467 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 IL9RQ01113 521 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 OGDHQ02218 1023 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 INO80CQ6PI98 192 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-204ENST00000526430 XKR5Q6UX68 686 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 ARCQ7LC44 396 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 DEFB106AQ8N104 65 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 SNX19Q92543 992 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 NAF1Q96HR8 494 aaKnown RBP11.28□□□□□ -0.6
NEDD8-204ENST00000526430 VCPIP1Q96JH7 1222 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms