RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HDAC6Q9UBN7 1215 aa4.92□□□□□ -1.62
CSDE1-211ENST00000525970 CCNL1Q9UK58 526 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-211ENST00000525970 OSGIN2Q9Y236 505 aa4.92□□□□□ -1.62
CSDE1-211ENST00000525970 SNX8Q9Y5X2 465 aa4.92□□□□□ -1.62
CSDE1-211ENST00000525970 LYVE1Q9Y5Y7 322 aa4.92□□□□□ -1.62
CSDE1-211ENST00000525970 TMEM232C9JQI7 657 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 AP3D1O14617 1153 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 LDLRAD4O15165 306 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 VILLO15195 856 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 TMPRSS11DO60235 418 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 PRAMEF2O60811 474 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 CCNDBP1O95273 360 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 STARD3NLO95772 234 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 ALDOAP04075 364 aaKnown RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 CSH1P0DML2 217 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 CSH2P0DML3 217 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 GLULP15104 373 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 PSMB10P40306 273 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 MTNR1AP48039 350 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 CCT8P50990 548 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 RARSP54136 660 aaKnown RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 UFM1P61960 85 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 GPC5P78333 572 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 RAE1P78406 368 aaKnown RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 IFI35P80217 286 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 PSG6Q00889 435 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 E2F1Q01094 437 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 ROR1Q01973 937 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 EPS8Q12929 822 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 RILPL1Q5EBL4 403 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 SH2D4BQ5SQS7 431 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 MFSD4BQ5TF39 518 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 NAPEPLDQ6IQ20 393 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 KLHL24Q6TFL4 600 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 RASAL3Q86YV0 1011 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 SCN4BQ8IWT1 228 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 CCDC105Q8IYK2 499 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 EXD3Q8N9H8 876 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 XAGE5Q8WWM1 108 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 EDC3Q96F86 508 aaKnown RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 C5orf34Q96MH7 638 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 UROC1Q96N76 676 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 MPHOSPH8Q99549 860 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 SLF1Q9BQI6 1058 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 TXLNGYQ9BZA5 131 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 SH3GLB2Q9NR46 395 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 ABHD10Q9NUJ1 306 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 HCFC1R1Q9NWW0 138 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 ALKBH4Q9NXW9 302 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 KLQ9UEF7 1012 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 SLCO3A1Q9UIG8 710 aa4.91□□□□□ -1.62
CSDE1-211ENST00000525970 NOL7Q9UMY1 257 aaKnown RBP4.91□□□□□ -1.62
CSDE1-211ENST00000525970 KAT6AQ92794 2004 aa4.9□□□□□ -1.62
CSDE1-211ENST00000525970 GCOM1H8Y6P7 765 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 QSOX1O00391 747 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RPN1P04843 607 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 COX7A2P14406 83 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 GPD1P21695 349 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SFPQP23246 707 aaKnown RBP eCLIP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 CYP2C18P33260 490 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 ABCD1P33897 745 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 DIO1P49895 249 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RPL7AP62424 266 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SEMA3AQ14563 771 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 NAA25Q14CX7 972 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SLC9B1Q4ZJI4 515 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RUNDC3AQ59EK9 446 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RPUSD3Q6P087 351 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 GJB7Q6PEY0 223 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 KYAT3Q6YP21 454 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 Q6ZWC4 215 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 LINC01465Q8N7H1 131 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 PLD5Q8N7P1 536 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 ENDOVQ8N8Q3 282 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RP9Q8TA86 221 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 RAB40AQ8WXH6 277 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SMG7Q92540 1137 aaKnown RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SNX18Q96RF0 628 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 TIMP4Q99727 224 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 THAP7Q9BT49 309 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-211ENST00000525970 HTATIP2Q9BUP3 242 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 PCDHB16Q9NRJ7 776 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 SERTAD4Q9NUC0 356 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 MPP6Q9NZW5 540 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 MGAT4CQ9UBM8 478 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 PCDHGB4Q9UN71 923 aa4.9□□□□□ -1.63
CSDE1-211ENST00000525970 LIPT2A6NK58 231 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 PTGES3LE9PB15 166 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF213O14771 459 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 PER2O15055 1255 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 DKC1O60832 514 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ERAL1O75616 437 aaKnown RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 SEC14L2O76054 403 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 JAK3P52333 1124 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 TPTEP56180 551 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 TXNL4AP83876 142 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms