RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 SH2D3CQ8N5H7 860 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 RTL3Q8N8U3 475 aaKnown RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 DCAF4L2Q8NA75 395 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 ZNF564Q8TBZ8 553 aaPredicted RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 CTNNBL1Q8WYA6 563 aaPredicted RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 PANX2Q96RD6 677 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 EPAS1Q99814 870 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 CATSPERBQ9H7T0 1116 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 CD93Q9NPY3 652 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 WSB2Q9NYS7 404 aaPredicted RBP13.26□□□□□ -0.29
CTSB-209ENST00000525315 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 DNAI1Q9UI46 699 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 GMEB2Q9UKD1 530 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 CYP8B1Q9UNU6 501 aa13.26□□□□□ -0.29
CTSB-209ENST00000525315 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 MAP3K13O43283 966 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 LRP3O75074 770 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 LCA5LO95447 670 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 CD160O95971 181 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 ACADMP11310 421 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 SRCP12931 536 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 TCF4P15884 667 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 FECHP22830 423 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 GLDCP23378 1020 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 OXTRP30559 389 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 ETFBP38117 255 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 TPMTP51580 245 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 TCEAL1Q15170 157 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 UMODL1-AS1Q8N2C9 162 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 GPR161Q8N6U8 529 aaKnown RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 SLC35G2Q8TBE7 412 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 KCTD15Q96SI1 283 aaPredicted RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 SPON2Q9BUD6 331 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 NOL6Q9H6R4 1146 aaKnown RBP13.25□□□□□ -0.29
CTSB-209ENST00000525315 ATP13A1Q9HD20 1204 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 CTTNBP2NLQ9P2B4 639 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 PCDHGA5Q9Y5G8 931 aa13.25□□□□□ -0.29
CTSB-209ENST00000525315 GVINP1Q7Z2Y8 2422 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 SMAD6O43541 496 aaKnown RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 KDELR3O43731 214 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 RNASEH1O60930 286 aaKnown RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 MTA2O94776 668 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 PROSCO94903 275 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 RARAP10276 462 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 VAV1P15498 845 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 CD6P30203 668 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 CDC25BP30305 580 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 ACVRL1P37023 503 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 CLCN6P51797 869 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 YBEYP58557 167 aaPredicted RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 TPI1P60174 286 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 ARF5P84085 180 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 ACCSLQ4AC99 568 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 PLA2G2CQ5R387 149 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 ZNF776Q68DI1 518 aaPredicted RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 RETSATQ6NUM9 610 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 TMEFF1Q8IYR6 380 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 STK40Q8N2I9 435 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 ARRDC1-AS1Q9H2J1 176 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 OSGEPQ9NPF4 335 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
CTSB-209ENST00000525315 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
CTSB-209ENST00000525315 K7ERQ8 282 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 CBX4O00257 560 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 EEF2KO00418 725 aaKnown RBP13.23□□□□□ -0.29
CTSB-209ENST00000525315 MCF2LO15068 1137 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 ALOX15BO15296 676 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 RAMP2O60895 175 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 ZNF821O75541 412 aaPredicted RBP13.23□□□□□ -0.29
CTSB-209ENST00000525315 DNTTP04053 509 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 GOT1P17174 413 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 ARHGAP25P42331 645 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
CTSB-209ENST00000525315 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
CTSB-209ENST00000525315 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 LINGO4Q6UY18 593 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 RFX8Q6ZV50 586 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 USP30Q70CQ3 517 aa13.23□□□□□ -0.29
CTSB-209ENST00000525315 TMTC1Q8IUR5 882 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms