RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 SARDHQ9UL12 918 aa12.99□□□□□ -0.33
TOP1MT-217ENST00000523417 VANGL2Q9ULK5 521 aa12.99□□□□□ -0.33
TOP1MT-217ENST00000523417 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
TOP1MT-217ENST00000523417 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
TOP1MT-217ENST00000523417 I6L893 689 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 ENDOD1O94919 500 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 ADCY5O95622 1261 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 LSM8O95777 96 aaKnown RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 VAV1P15498 845 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CYP11B1P15538 503 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CLCN6P51797 869 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CENPCQ03188 943 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 SLC20A2Q08357 652 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CCDC15Q0P6D6 951 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 NME3Q13232 169 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 LAYNQ6UX15 382 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 PASD1Q8IV76 773 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CACTIN-AS1Q8N1I8 211 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 TSC1Q92574 1164 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 SERAC1Q96JX3 654 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 HAPLN3Q96S86 360 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 PSMB7Q99436 277 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 STK33Q9BYT3 514 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 TKTL2Q9H0I9 626 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 SYNCQ9H7C4 482 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 PREBQ9HCU5 417 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 GDF3Q9NR23 364 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 AASDHPPTQ9NRN7 309 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 GPSM3Q9Y4H4 160 aa12.98□□□□□ -0.33
TOP1MT-217ENST00000523417 KNTC1P50748 2209 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 C1QTNF3-AMACRE9PGA6 284 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 RTN2O75298 545 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 SRCP12931 536 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 IRAK1P51617 712 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 LRRC31Q6UY01 552 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 CLEC17AQ6ZS10 378 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 KANSL1Q7Z3B3 1105 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ERICH1Q86X53 443 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 XYLT1Q86Y38 959 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 OR2A12Q8NGT7 310 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 SIK2Q9H0K1 926 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 PLCB1Q9NQ66 1216 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ANLNQ9NQW6 1124 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 COX16Q9P0S2 106 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ZNF212Q9UDV6 495 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 FTSJ1Q9UET6 329 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 DMXL2Q8TDJ6 3036 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ASPMQ8IZT6 3477 aa12.97□□□□□ -0.33
TOP1MT-217ENST00000523417 ILVBLA1L0T0 632 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PRAMEF26H0Y7S4 382 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 CNTN5O94779 1100 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 MT-CO1P00395 513 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 ITGAVP06756 1048 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 UCHL3P15374 230 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 EPHA8P29322 1005 aaPredicted RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 CHRNA3P32297 505 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 METAP1P53582 386 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 TAS2R38P59533 333 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PPP2CBP62714 309 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PPP2CAP67775 309 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 DEUP1Q05D60 604 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 ILKQ13418 452 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 ALFQ53S48 1182 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 C6orf118Q5T5N4 469 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 ZNF677Q86XU0 584 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 SPATS2Q86XZ4 545 aaKnown RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PLPP6Q8IY26 295 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 DCAF4L2Q8NA75 395 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 TBCBQ99426 244 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PPARGC1AQ9UBK2 798 aaKnown RBP12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 DAAM1Q9Y4D1 1078 aa12.96□□□□□ -0.33
TOP1MT-217ENST00000523417 PLXNB3Q9ULL4 1909 aa12.96□□□□□ -0.34
TOP1MT-217ENST00000523417 ANKRD11Q6UB99 2663 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms