RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CCNHP51946 323 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 TBX4P57082 545 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 SH3BP5LQ7L8J4 393 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 DAW1Q8N136 415 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 FBXO44Q9H4M3 255 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 COPS7BQ9H9Q2 264 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 RABGEF1Q9UJ41 708 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 LDLRP01130 860 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 KLRC2P26717 231 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 CDKN2BP42772 138 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 WDR4P57081 412 aaKnown RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 RHOAP61586 193 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 TRAF2Q12933 501 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 OTUD3Q5T2D3 398 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 CPT1BQ92523 772 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 DLG3Q92796 817 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 MAML3Q96JK9 1138 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 SERPINB11Q96P15 392 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF670Q9BS34 389 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 COMMD8Q9NX08 183 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 DOCK2Q92608 1830 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 FAM95CA0A1B0GW59 222 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 POMCP01189 267 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 FAM98BQ52LJ0 330 aaKnown RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 ACOX2Q99424 681 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 CCDC28BQ9BUN5 200 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 H2AFY2Q9P0M6 372 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 MAGEC1O60732 1142 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 EGFRP00533 1210 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 LGALS2P05162 132 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 KPNA1P52294 538 aaPredicted RBP14.04□□□□□ -0.16
SYNPO-205ENST00000522122 ARHGAP22Q7Z5H3 698 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 C7orf26Q96N11 449 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 ELOVL6Q9H5J4 265 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 POMKQ9H5K3 350 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 MYRFQ9Y2G1 1151 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 XIAPP98170 497 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 FRG1Q14331 258 aaKnown RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 FAM84AQ96KN4 292 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 PRDM12Q9H4Q4 367 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 WDR41Q9HAD4 459 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 PALMDQ9NP74 551 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ZC4H2Q9NQZ6 224 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 BCORQ6W2J9 1755 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF682O95780 498 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 USP17L7P0C7H9 530 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 GSTT1P30711 240 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 PPIDQ08752 370 aaKnown RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 TTC30AQ86WT1 665 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 MIER2Q8N344 545 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ASB2Q96Q27 587 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 DPY30Q9C005 99 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 PARVBQ9HBI1 364 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 OR12D3Q9UGF7 316 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ARIH2O95376 493 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 SLC2A4P14672 509 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 OR1E1P30953 314 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 UBE3AQ05086 875 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 VAC14Q08AM6 782 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ZSCAN18Q8TBC5 510 aaPredicted RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CASP10Q92851 521 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 MPP4Q96JB8 637 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF570Q96NI8 536 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 SPATA16Q9BXB7 569 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CADM1Q9BY67 442 aaKnown RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ELOVL4Q9GZR5 314 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 TLR8Q9NR97 1041 aaKnown RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 DPPA5A6NC42 116 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 KRT6AP02538 564 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 KRT6BP04259 564 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 MBL2P11226 248 aaPredicted RBP14.03□□□□□ -0.16
SYNPO-205ENST00000522122 KRT6CP48668 564 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CCNG1P51959 295 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 KIAA0319LQ8IZA0 1049 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 FNDC5Q8NAU1 212 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 GLMNQ92990 594 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 BBS2Q9BXC9 721 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 EPS8L2Q9H6S3 715 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
SYNPO-205ENST00000522122 CCNE2O96020 404 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 ADSSP30520 456 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 PCID2Q5JVF3 399 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 CARNMT1Q8N4J0 409 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 BANPQ8N9N5 519 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 SENP8Q96LD8 212 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 MYPNQ86TC9 1320 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 SPATA31C2B4DYI2 1134 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms