RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PDK1Q15118 436 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 NOMO1Q15155 1222 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 FSTL4Q6MZW2 842 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 LRRC49Q8IUZ0 686 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 LRRN4Q8WUT4 740 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 EZH1Q92800 747 aaPredicted RBP24.7■■□□□ 1.54
PVT1-212ENST00000521951 C2orf49Q9BVC5 232 aaPredicted RBP24.7■■□□□ 1.54
PVT1-212ENST00000521951 ELOVL2Q9NXB9 296 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 IPO11Q9UI26 975 aaKnown RBP24.7■■□□□ 1.54
PVT1-212ENST00000521951 VPS51Q9UID3 782 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 HPCAL4Q9UM19 191 aa24.7■■□□□ 1.54
PVT1-212ENST00000521951 NUDT18Q6ZVK8 323 aa24.69■■□□□ 1.54
PVT1-212ENST00000521951 ATPAF2Q8N5M1 289 aa24.69■■□□□ 1.54
PVT1-212ENST00000521951 ACDQ96AP0 544 aa24.69■■□□□ 1.54
PVT1-212ENST00000521951 CIPCQ9C0C6 399 aa24.69■■□□□ 1.54
PVT1-212ENST00000521951 RNF14Q9UBS8 474 aa24.69■■□□□ 1.54
PVT1-212ENST00000521951 J3KR12 359 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 TIMM44O43615 452 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 MAFKO60675 156 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 DRD1P21728 446 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 CTSOP43234 321 aaPredicted RBP24.68■■□□□ 1.54
PVT1-212ENST00000521951 TNFRSF4P43489 277 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 STARD6P59095 220 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 GRSF1Q12849 480 aaKnown RBP eCLIP24.68■■□□□ 1.54
PVT1-212ENST00000521951 ZNF852Q6ZMS4 543 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 ZC3H18Q86VM9 953 aaKnown RBP24.68■■□□□ 1.54
PVT1-212ENST00000521951 SIX5Q8N196 739 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 CCNYQ8ND76 341 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 HDAC11Q96DB2 347 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 TSGA13Q96PP4 275 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 LGMNQ99538 433 aa24.68■■□□□ 1.54
PVT1-212ENST00000521951 MYO18AQ92614 2054 aaKnown RBP24.68■■□□□ 1.54
PVT1-212ENST00000521951 K7EQS6 105 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 PDE2AO00408 941 aaPredicted RBP24.67■■□□□ 1.54
PVT1-212ENST00000521951 PRAMEF11O60813 436 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 EGFP01133 1207 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 EIF3EP60228 445 aaKnown RBP24.67■■□□□ 1.54
PVT1-212ENST00000521951 ARF5P84085 180 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 SULT2A1Q06520 285 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 XRCC4Q13426 336 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 EIF4HQ15056 248 aaKnown RBP24.67■■□□□ 1.54
PVT1-212ENST00000521951 B4GALNT4Q76KP1 1039 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 C1orf54Q8WWF1 131 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 SORCS1Q8WY21 1168 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 ATG4AQ8WYN0 398 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 SHDQ96IW2 340 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 AP1M1Q9BXS5 423 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 CDC23Q9UJX2 597 aa24.67■■□□□ 1.54
PVT1-212ENST00000521951 ATG2BQ96BY7 2078 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 ANTXRLA6NF34 631 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 PPP1R12AO14974 1030 aaPredicted RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 ATP5BP06576 529 aaKnown RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 CCNCP24863 283 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 PAFAH1B1P43034 410 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 ECT2LQ008S8 904 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 IL10RBQ08334 325 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 PPIDQ08752 370 aaKnown RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 LINGO4Q6UY18 593 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 LEKR1Q6ZMV7 388 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 SLC35B2Q8TB61 432 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 CYB5D2Q8WUJ1 264 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 BRD8Q9H0E9 1235 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 SP110Q9HB58 689 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 PDFQ9HBH1 243 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 NDRG2Q9UN36 371 aaKnown RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 ERVW-1Q9UQF0 538 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 ACTL7AQ9Y615 435 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 H7C0C1 242 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 MCF2LO15068 1137 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 CD160O95971 181 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 ASLP04424 464 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 RBP3P10745 1247 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 ATP5OP48047 213 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 RETSATQ6NUM9 610 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 PRELID2Q8N945 189 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 TFB1MQ8WVM0 346 aaKnown RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 RPL10LQ96L21 214 aaKnown RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 FRMD8P1Q9BZ68 369 aaPredicted RBP24.66■■□□□ 1.54
PVT1-212ENST00000521951 HCN2Q9UL51 889 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 DNPEPQ9ULA0 475 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 STARD13Q9Y3M8 1113 aa24.66■■□□□ 1.54
PVT1-212ENST00000521951 TRIOO75962 3097 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 ZSCAN5CA6NGD5 496 aaPredicted RBP24.65■■□□□ 1.54
PVT1-212ENST00000521951 HACD1B0YJ81 288 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 KRIT1O00522 736 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 LIASO43766 372 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 MT-CO1P00395 513 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 DLDP09622 509 aaKnown RBP24.65■■□□□ 1.54
PVT1-212ENST00000521951 STK19P49842 368 aaPredicted RBP24.65■■□□□ 1.54
PVT1-212ENST00000521951 AP1B1Q10567 949 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 PRKD1Q15139 912 aaPredicted RBP24.65■■□□□ 1.54
PVT1-212ENST00000521951 CCNG2Q16589 344 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 EMC10Q5UCC4 262 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 CCDC13Q8IYE1 715 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 UCMAQ8WVF2 138 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 EDAQ92838 391 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 MRGPRX3Q96LB0 322 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 QKIQ96PU8 341 aaKnown RBP eCLIP24.65■■□□□ 1.546e-7■■■■□ 20.1
PVT1-212ENST00000521951 C10orf88Q9H8K7 445 aa24.65■■□□□ 1.54
PVT1-212ENST00000521951 SLC25A13Q9UJS0 675 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms