RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PHKBQ93100 1093 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 TEKT1Q969V4 418 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 NSUN4Q96CB9 384 aaKnown RBP3.66□□□□□ -1.82
VPS13B-209ENST00000521559 EVI5LQ96CN4 794 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 IQCDQ96DY2 449 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 PRMT6Q96LA8 375 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-209ENST00000521559 ADGRE3Q9BY15 652 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.66□□□□□ -1.822e-7■■■■■ 44.3
VPS13B-209ENST00000521559 ZBTB26Q9HCK0 441 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 MYOZ2Q9NPC6 264 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 TBC1D23Q9NUY8 699 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 TMOD4Q9NZQ9 345 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 RAI14Q9P0K7 980 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 PGAP2Q9UHJ9 254 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 VPS51Q9UID3 782 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 AFG3L2Q9Y4W6 797 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 GAKO14976 1311 aa3.66□□□□□ -1.82
VPS13B-209ENST00000521559 ZMYM2Q9UBW7 1377 aa3.65□□□□□ -1.82
VPS13B-209ENST00000521559 LRRC37AA6NMS7 1700 aa3.65□□□□□ -1.82
VPS13B-209ENST00000521559 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 TTC34A8MYJ7 566 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 AGPSO00116 658 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 AREL1O15033 823 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 COQ9O75208 318 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 WDR47O94967 919 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 BAG3O95817 575 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ZFYP08048 801 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 IDEP14735 1019 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ATF7P17544 494 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 NTSR1P30989 418 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ADD2P35612 726 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 JAK3P52333 1124 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 RBM5P52756 815 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 COPAP53621 1224 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 GPC5P78333 572 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF91Q05481 1191 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 RBMS2Q15434 407 aaKnown RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 SLC9C1Q4G0N8 1177 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 TTC22Q5TAA0 569 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 SLC9C2Q5TAH2 1124 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 APOBEC3HQ6NTF7 200 aaKnown RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 CDC42EP5Q6NZY7 148 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 BEND5Q7L4P6 421 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ANKRD13BQ86YJ7 626 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 CNTROBQ8N137 903 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 CCDC150Q8NCX0 1101 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ZC3H10Q96K80 434 aaKnown RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 FSD1Q9BTV5 496 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 SELENOOQ9BVL4 669 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 NUAK2Q9H093 628 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 SLC25A32Q9H2D1 315 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 TDRD3Q9H7E2 651 aaKnown RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ARNT2Q9HBZ2 717 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ARL8BQ9NVJ2 186 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 PCDHAC2Q9Y5I4 1007 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 DLEC1Q9Y238 1755 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 COL1A1P02452 1464 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-209ENST00000521559 MROH7-TTC4A0A0A0MT08 1334 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF532Q9HCE3 1301 aa3.65□□□□□ -1.83
VPS13B-209ENST00000521559 TLR2O60603 784 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 TOMM70O94826 608 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 TMIGD3P0DMS9 266 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 CTSAP10619 480 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 SCP2P22307 547 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 BTDP43251 543 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 RHBDL3P58872 404 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 DYNLL1P63167 89 aaKnown RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 DEUP1Q05D60 604 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 STIM1Q13586 685 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 DNASE1L3Q13609 305 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 SAFBQ15424 915 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF260Q3ZCT1 412 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 COBLL1Q53SF7 1204 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 AWAT1Q58HT5 328 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 BMP2KLQ5H9B9 411 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 FKBP1CQ5VVH2 108 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 AWAT2Q6E213 333 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 ADGRA1Q86SQ6 560 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 CERS3Q8IU89 383 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 ATP11CQ8NB49 1132 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 MPLKIPQ8TAP9 179 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 BCAS4Q8TDM0 211 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 NSMCE1Q8WV22 266 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 PMM1Q92871 262 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 RILPL2Q969X0 211 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 DCPSQ96C86 337 aaKnown RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 TIFAQ96CG3 184 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 TRMOQ9BU70 441 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 EIF2AQ9BY44 585 aaKnown RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 RNF26Q9BY78 433 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 HELLSQ9NRZ9 838 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 POT1Q9NUX5 634 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 AATFQ9NY61 560 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 TMOD2Q9NZR1 351 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 PCDHGB6Q9Y5F9 930 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 ASTN2O75129 1339 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-209ENST00000521559 LTBP1Q14766 1721 aa3.64□□□□□ -1.83
VPS13B-209ENST00000521559 BRCA1P38398 1863 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms