RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 IL27RAQ6UWB1 636 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 MON1BQ7L1V2 547 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 AADATQ8N5Z0 425 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 C3orf20Q8ND61 904 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 SNX19Q92543 992 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 BAP1Q92560 729 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 FAM131CQ96AQ9 280 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 ORAI3Q9BRQ5 295 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 C2orf49Q9BVC5 232 aaPredicted RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 OSBPL2Q9H1P3 480 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 SLCO1B1Q9Y6L6 691 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 TCRBV5S1A1TA0A578 114 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 ILVBLA1L0T0 632 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 LRRC72A6NJI9 287 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 MCF2LO15068 1137 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 ALOX15BO15296 676 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 MT-CO1P00395 513 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 SRCP12931 536 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 SHC2P98077 582 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 CDO1Q16878 200 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 WDR59Q6PJI9 974 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 TFAP2DQ7Z6R9 452 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 DSG4Q86SJ6 1040 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 OR2T34Q8NGX1 318 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 OR8D1Q8WZ84 308 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 RETREG1Q9H6L5 497 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 TM9SF3Q9HD45 589 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 SEPT11Q9NVA2 429 aaKnown RBP17.48■□□□□ 0.39
SQLE-205ENST00000521232 OR12D3Q9UGF7 316 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 VPS51Q9UID3 782 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 PPM1HQ9ULR3 514 aa17.48■□□□□ 0.39
SQLE-205ENST00000521232 EPG5Q9HCE0 2579 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 A0A1B0GTH6 734 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 A0A1W2PPC4 97 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 A0A1W2PQC6 194 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 FAM47DPA6NHR8 397 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 SNAP91O60641 907 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 GPD1P21695 349 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 DRD3P35462 400 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 CSNK1EP49674 416 aaKnown RBP17.47■□□□□ 0.39
SQLE-205ENST00000521232 HDAC4P56524 1084 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 MANEALQ5VSG8 457 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 FAM46CQ5VWP2 391 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 DCAF4L2Q8NA75 395 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 ATP11CQ8NB49 1132 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
SQLE-205ENST00000521232 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 SARDHQ9UL12 918 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 CHD5Q8TDI0 1954 aa17.47■□□□□ 0.39
SQLE-205ENST00000521232 A0A1B0GVT2 93 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 ZNF883P0CG24 379 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 GRIA4P48058 902 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 CCR5P51681 352 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 CLCN6P51797 869 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 ADPRHP54922 357 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
SQLE-205ENST00000521232 NR1I3Q14994 352 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 TEAD4Q15561 434 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 HLA-BQ31612 363 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 PPP1R15BQ5SWA1 713 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
SQLE-205ENST00000521232 Q6ZVU0 165 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 MCOLN2Q8IZK6 566 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 OR7D4Q8NG98 312 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 OR14C36Q8NHC7 312 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 NTAN1Q96AB6 310 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 VCPIP1Q96JH7 1222 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 CNTNAP3BQ96NU0 1288 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 CNTNAP3Q9BZ76 1288 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 KDM4CQ9H3R0 1056 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 GAREM1Q9H706 876 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 EBF2Q9HAK2 575 aa17.46■□□□□ 0.39
SQLE-205ENST00000521232 TPX2Q9ULW0 747 aaKnown RBP17.46■□□□□ 0.39
SQLE-205ENST00000521232 FAM72CH0Y354 149 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 K7ERQ8 282 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 SLC7A4O43246 635 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 SMAD6O43541 496 aaKnown RBP17.45■□□□□ 0.38
SQLE-205ENST00000521232 ZMPSTE24O75844 475 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 CER1O95813 267 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 TNFAIP3P21580 790 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 ZNF143P52747 638 aaPredicted RBP17.45■□□□□ 0.38
SQLE-205ENST00000521232 METAP1P53582 386 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 RACK1P63244 317 aaKnown RBP17.45■□□□□ 0.38
SQLE-205ENST00000521232 GNA12Q03113 381 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 SLC20A2Q08357 652 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 KIF19Q2TAC6 998 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 FAM72AQ5TYM5 149 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 FAM72DQ6L9T8 149 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 PPP1R2P3Q6NXS1 205 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 DNAJC24Q6P3W2 148 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 DBX2Q6ZNG2 339 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms