RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 MCF2LO15068 1137 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 ALOX15BO15296 676 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 SMC2O95347 1197 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 TRUB2O95900 331 aaKnown RBP11.82□□□□□ -0.52
MRPS28-206ENST00000520946 HNRNPA2B1P22626 353 aaKnown RBP11.82□□□□□ -0.52
MRPS28-206ENST00000520946 CCR1P32246 355 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 PRCPP42785 496 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 FMO5P49326 533 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 METAP1P53582 386 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 HNRNPKP61978 463 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRPS28-206ENST00000520946 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
MRPS28-206ENST00000520946 KRT83P78385 493 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 VAC14Q08AM6 782 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 MTA1Q13330 715 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 LY6DQ14210 128 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 C3orf38Q5JPI3 329 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 SYPL2Q5VXT5 272 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 NEK5Q6P3R8 708 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 Q6ZVU0 165 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 RRAGAQ7L523 313 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 KANSL1Q7Z3B3 1105 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 FAM181AQ8N9Y4 354 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 SNX21Q969T3 373 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 APOLD1Q96LR9 279 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 CLMPQ9H6B4 373 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 USP29Q9HBJ7 922 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 UCKL1Q9NWZ5 548 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 NLGN3Q9NZ94 848 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 SARDHQ9UL12 918 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 PPM1HQ9ULR3 514 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 ATP6V1DQ9Y5K8 247 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
MRPS28-206ENST00000520946 FLNBO75369 2602 aaKnown RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PTPRQQ9UMZ3 2332 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 B8ZZF3 427 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 SLC28A2O43868 658 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 GABBR2O75899 941 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PIAS2O75928 621 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 CALCAP01258 141 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 GP1BAP07359 652 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 C6P13671 934 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PLK1P53350 603 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 LRRC63Q05C16 580 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PKP1Q13835 747 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 AGBL4Q5VU57 503 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 ANKRD40Q6AI12 368 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PTAR1Q7Z6K3 402 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 HORMAD1Q86X24 394 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 DCP2Q8IU60 420 aaKnown RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 IFI44Q8TCB0 444 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 FRS2Q8WU20 508 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 PPP1R16AQ96I34 528 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 VCPIP1Q96JH7 1222 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 SCAND2PQ9GZW5 306 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 THAP9Q9H5L6 903 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 SYNDIG1Q9H7V2 258 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 FZD3Q9NPG1 666 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 DDIT4Q9NX09 232 aa11.81□□□□□ -0.52
MRPS28-206ENST00000520946 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
MRPS28-206ENST00000520946 A6NNZ2 444 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 RNF225M0QZC1 329 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-206ENST00000520946 PSMA7O14818 248 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 THAP12O43422 761 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 ATP9BO43861 1147 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 LETM1O95202 739 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-206ENST00000520946 PRNPP04156 253 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 FYNP06241 537 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 MYF5P13349 255 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 CHRNA3P32297 505 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 CLDN2P57739 230 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-206ENST00000520946 NME3Q13232 169 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 SGCGQ13326 291 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 PNOCQ13519 176 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 ZNF542PQ5EBM4 170 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 ZNF658Q5TYW1 1059 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-206ENST00000520946 FBXL22Q6P050 247 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 CCDC81Q6ZN84 652 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 Q6ZSR6 202 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 BEND5Q7L4P6 421 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 PRICKLE2Q7Z3G6 844 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 ARL14Q8N4G2 192 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 UBR7Q8N806 425 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 OR13H1Q8NG92 308 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 TPCN2Q8NHX9 752 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 GLMNQ92990 594 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 SLC35C1Q96A29 364 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 HIC2Q96JB3 615 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 IL12RB2Q99665 862 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 FEM1AQ9BSK4 669 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-206ENST00000520946 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms