RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 DYNC1I2Q13409 638 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 THOC5Q13769 683 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 ACSBG2Q5FVE4 666 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 RARS2Q5T160 578 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 C1orf146Q5VVC0 180 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 AP1ARQ63HQ0 302 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 HEATR6Q6AI08 1181 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SYCE2Q6PIF2 218 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 C1orf228Q6PIY5 440 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 RINLQ6ZS11 566 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SDCCAG8Q86SQ7 713 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PRPF39Q86UA1 669 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 ARID3BQ8IVW6 561 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 ST13P4Q8IZP2 240 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 LRRC43Q8N309 656 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 CEP120Q8N960 986 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 ZFAND2BQ8WV99 257 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 RXFP2Q8WXD0 754 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SUSD6Q92537 303 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PTPRN2Q92932 1015 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SNX27Q96L92 541 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 HEXIM2Q96MH2 286 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 CASD1Q96PB1 797 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 KLF6Q99612 283 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 CDCA3Q99618 268 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PRRX2Q99811 253 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 EBNA1BP2Q99848 306 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 WDR83Q9BRX9 315 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 NT5C1AQ9BXI3 368 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 YIPF3Q9GZM5 350 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 MFSD1Q9H3U5 465 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 FZD8Q9H461 694 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SMYD3Q9H7B4 428 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PCDH18Q9HCL0 1135 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 FBXO6Q9NRD1 293 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PCMTD2Q9NV79 361 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 RCOR3Q9P2K3 495 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 DCDC2Q9UHG0 476 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 ADAM28Q9UKQ2 775 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 DERAQ9Y315 318 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 C2CD2Q9Y426 696 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 HCFC2Q9Y5Z7 792 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 MAD1L1Q9Y6D9 718 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 COL1A2P08123 1366 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 PIEZO1Q92508 2521 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 DMDP11532 3685 aa8.84□□□□□ -0.99
CTNNA1-223ENST00000520520 SF3B1O75533 1304 aaKnown RBP eCLIP8.83□□□□□ -19e-6■■■■■ 68.9
CTNNA1-223ENST00000520520 GOLGA8QA0A0J9YX86 632 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 GOLGA8OA6NCC3 632 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 GOLGA8NF8WBI6 632 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 HRO43593 1189 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 SNNO75324 88 aaPredicted RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 GPR32O75388 356 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 SERPINE1P05121 402 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 EDN1P05305 212 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 CD48P09326 243 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 LINGO3P0C6S8 592 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 CXCL8P10145 99 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 GM2AP17900 193 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 PRDX6P30041 224 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 PEX19P40855 299 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 GPD2P43304 727 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 PTPN9P43378 593 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 RAP1GAPP47736 663 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 COPAP53621 1224 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 AQP5P55064 265 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 ACTR3P61158 418 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 ROR2Q01974 943 aaKnown RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 GAD2Q05329 585 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 MBTD1Q05BQ5 628 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 DEUP1Q05D60 604 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 SEMA5AQ13591 1074 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 INSCQ1MX18 579 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 GOLGA7BQ2TAP0 167 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 DCAF4L1Q3SXM0 396 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 KHDC1Q4VXA5 237 aaKnown RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 TEX44Q53QW1 395 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 EFHC1Q5JVL4 640 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 CLLU1OSQ5K130 101 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 TMCO4Q5TGY1 634 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 STEAP4Q687X5 459 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 CES5AQ6NT32 575 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 RFWD3Q6PCD5 774 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 SH2D5Q6ZV89 423 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 FAM183BPQ6ZVS7 135 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 PSTKQ8IV42 348 aaKnown RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 ULK2Q8IYT8 1036 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 KIRREL3Q8IZU9 778 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 NDUFAF2Q8N183 169 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 TAB3Q8N5C8 712 aaPredicted RBP8.83□□□□□ -1
CTNNA1-223ENST00000520520 ARFGAP1Q8N6T3 406 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 PLD5Q8N7P1 536 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 STKLD1Q8NE28 680 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 NLRP7Q8WX94 980 aa8.83□□□□□ -1
CTNNA1-223ENST00000520520 CASP10Q92851 521 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms