RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TKTP29401 623 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TRAF2Q12933 501 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 MFSD10Q14728 455 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TSNQ15631 228 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TCHHL1Q5QJ38 904 aaPredicted RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 RBM20Q5T481 1227 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 REPS2Q8NFH8 660 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 BTBD10Q9BSF8 475 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TMEM120AQ9BXJ8 343 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 ENTPD7Q9NQZ7 604 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 H3BRB1 525 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PHGDHO43175 533 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 RIPK2O43353 540 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 SCGNO76038 276 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 XIAPP98170 497 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 EGFLAMQ63HQ2 1017 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 MRPS31Q92665 395 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 ACAT2Q9BWD1 397 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 TLR8Q9NR97 1041 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 AASDHPPTQ9NRN7 309 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 A0A1W2PQ72 361 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 CXCL11O14625 94 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 GLI1P08151 1106 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PPP2R1BP30154 601 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PLCL1Q15111 1095 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 ZNF410Q86VK4 478 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 SNX32Q86XE0 403 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 PCDHA3Q9Y5H8 950 aa12.3□□□□□ -0.44
ERGIC1-208ENST00000520399 MAGEB16A2A368 324 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CHURC1-FNTBB4DL54 471 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 OPLAHO14841 1288 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PARNO95453 639 aaKnown RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 GRK4P32298 578 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SMU1Q2TAY7 513 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SLC27A1Q6PCB7 646 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CASP12Q6UXS9 341 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 VGLL2Q8N8G2 317 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 TDRD5Q8NAT2 981 aaKnown RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 ACMSDQ8TDX5 336 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 MTMR9Q96QG7 549 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CHMP1AQ9HD42 196 aaPredicted RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SAR1AQ9NR31 198 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 STMND1H3BQB6 276 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CPSF4O95639 269 aaKnown RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 RBP1P09455 135 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PAEPP09466 180 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 LBPP18428 481 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 EPHB3P54753 998 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 FAM129BQ96TA1 746 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CHST12Q9NRB3 414 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 TAGLN3Q9UI15 199 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SIK3Q9Y2K2 1263 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 GLP2RO95838 553 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 URODP06132 367 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PAICSP22234 425 aaKnown RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 IL2P60568 153 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 DDR2Q16832 855 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 DNAAF5Q86Y56 855 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PHACTR4Q8IZ21 702 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 ARRDC4Q8NCT1 418 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 NT5MQ9NPB1 228 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 TRPV5Q9NQA5 729 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 LACTBL1A8MY62 500 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SLCO1B7G3V0H7 640 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PRMT3O60678 531 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 NOS1APO75052 506 aaPredicted RBP12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CYP7B1O75881 506 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 PCNAP12004 261 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 GNA13Q14344 377 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 GRTP1Q5TC63 336 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 SEL1L3Q68CR1 1132 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 CCDC185Q8N715 623 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
ERGIC1-208ENST00000520399 DNAJB3Q8WWF6 145 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms