RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PRRT4C9JH25 899 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 MCF2LO15068 1137 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 MAFKO60675 156 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 ZMPSTE24O75844 475 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 ASLP04424 464 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 CCNCP24863 283 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 TNFRSF4P43489 277 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 EIF3EP60228 445 aaKnown RBP18.19■□□□□ 0.5
SDC2-205ENST00000520233 ZNF33AQ06730 810 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 IL10RBQ08334 325 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 PPIDQ08752 370 aaKnown RBP18.19■□□□□ 0.5
SDC2-205ENST00000520233 PON2Q15165 354 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 CCNG2Q16589 344 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 ARHGAP36Q6ZRI8 547 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 CCDC33Q8N5R6 958 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 UHRF1Q96T88 793 aaPredicted RBP18.19■□□□□ 0.5
SDC2-205ENST00000520233 HOMER3Q9NSC5 361 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 ELOVL2Q9NXB9 296 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 IPO11Q9UI26 975 aaKnown RBP18.19■□□□□ 0.5
SDC2-205ENST00000520233 VPS51Q9UID3 782 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 CBX4O00257 560 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 KRIT1O00522 736 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 SNAP91O60641 907 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 PRAMEF11O60813 436 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 ATP5BP06576 529 aaKnown RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 DRD1P21728 446 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 STARD6P59095 220 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 ZXDAP98168 799 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
SDC2-205ENST00000520233 DNTTIP2Q5QJE6 756 aaKnown RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 TIGD7Q6NT04 549 aaPredicted RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 ZNF852Q6ZMS4 543 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 ZC3H18Q86VM9 953 aaKnown RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 PRELID2Q8N945 189 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 CCNYQ8ND76 341 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 SLC35B2Q8TB61 432 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 TFB1MQ8WVM0 346 aaKnown RBP18.18■□□□□ 0.5
SDC2-205ENST00000520233 C1orf54Q8WWF1 131 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 FATE1Q969F0 183 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 SHDQ96IW2 340 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 FAM118BQ9BPY3 351 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 CIPCQ9C0C6 399 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 SP110Q9HB58 689 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
SDC2-205ENST00000520233 KRBA1A5PL33 1030 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 H7C0C1 242 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 J3KR12 359 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 PDE2AO00408 941 aaPredicted RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 LIASO43766 372 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 DLDP09622 509 aaKnown RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 RBP3P10745 1247 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 GLDCP23378 1020 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 ATP5OP48047 213 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 NUMBP49757 651 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 ARF5P84085 180 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 ECT2LQ008S8 904 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 PRKD1Q15139 912 aaPredicted RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 WHAMMP3Q1A5X7 153 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 SLC45A4Q5BKX6 768 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 FSTL4Q6MZW2 842 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 RETSATQ6NUM9 610 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 DRICH1Q6PGQ1 229 aaPredicted RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 CDKL3Q8IVW4 592 aaPredicted RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 CCDC13Q8IYE1 715 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 UCMAQ8WVF2 138 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 ATG4AQ8WYN0 398 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 NKD2Q969F2 451 aaPredicted RBP18.17■□□□□ 0.5
SDC2-205ENST00000520233 ZNF599Q96NL3 588 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 QKIQ96PU8 341 aaKnown RBP eCLIP18.17■□□□□ 0.52e-13■■■□□ 19.2
SDC2-205ENST00000520233 LGMNQ99538 433 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 AP1M1Q9BXS5 423 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 SLC25A13Q9UJS0 675 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 STARD13Q9Y3M8 1113 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 MRFAP1Q9Y605 127 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 CHD5Q8TDI0 1954 aa18.17■□□□□ 0.5
SDC2-205ENST00000520233 GOLGA6L10A0A0M3HER8 536 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 K7EQS6 105 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 MATN3O15232 486 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 ZNF189O75820 626 aaPredicted RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 SRPRAP08240 638 aaKnown RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 CTSOP43234 321 aaPredicted RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 VASPP50552 380 aaPredicted RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 CKAP4Q07065 602 aaKnown RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 AP1B1Q10567 949 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 E2F5Q15329 346 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 CYP1B1Q16678 543 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 SFTPA1Q8IWL2 248 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 C12orf50Q8NA57 414 aaPredicted RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 EZH1Q92800 747 aaPredicted RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 DNPEPQ9ULA0 475 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 ERVW-1Q9UQF0 538 aa18.16■□□□□ 0.5
SDC2-205ENST00000520233 MRPS17Q9Y2R5 130 aaKnown RBP18.16■□□□□ 0.5
SDC2-205ENST00000520233 BCLAF3A2AJT9 711 aaKnown RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 MTSS1O43312 755 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms