RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CACNA1DQ01668 2161 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3DA0A087WVF3 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3IA0A087WXS9 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3EA0A087X179 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3KA0A087X1G2 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 EDDM13A0A1B0GTR0 161 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 A0A1W2PQH9 124 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SLC12A8A0AV02 714 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TYW5A2RUC4 315 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 BLACEA4D250 179 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3FA6NER0 549 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3LB9A6J9 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SCAMP1O15126 338 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 MID1O15344 667 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SDC3O75056 442 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KRT38O76015 456 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TNFSF15O95150 251 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 GCNT3O95395 438 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KLKB1P03952 638 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3HP0C7X1 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 FAM200BP0CF97 657 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 FAM157BP0CG42 384 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 PABPC1P11940 636 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KRT10P13645 584 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TNNI1P19237 187 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ELAVL4P26378 380 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 CD82P27701 267 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 HOXD9P28356 352 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SLC8A1P32418 973 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TOB1P50616 345 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 GDF10P55107 478 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 MAP3K7CLP57077 242 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 HNRNPKP61978 463 aaKnown RBP eCLIP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TRPC3Q13507 836 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 DHX8Q14562 1220 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 NCAPHQ15003 741 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 BMT2Q1RMZ1 405 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 HNRNPA1L2Q32P51 320 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 MANEAQ5SRI9 462 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3GQ6DHY5 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3CQ6IPX1 549 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 BORAQ6PGQ7 559 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 PAQR9Q6ZVX9 377 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 STXBP4Q6ZWJ1 553 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TMC6Q7Z403 805 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 DSG4Q86SJ6 1040 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ADIPOR2Q86V24 386 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 UNC93AQ86WB7 457 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SFR1Q86XK3 245 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SPATS2Q86XZ4 545 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 DENND1CQ8IV53 801 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D3Q8IZP1 549 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 FUKQ8N0W3 1084 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SLC25A45Q8N413 288 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 FAM184AQ8NB25 1140 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 OR5B17Q8NGF7 314 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 OR14C36Q8NHC7 312 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 NOC3LQ8WTT2 800 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 CYB5D2Q8WUJ1 264 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 NAT6Q93015 286 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SNX21Q969T3 373 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KLHDC7BQ96G42 594 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ATXN7L3BQ96GX2 97 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 PLIN2Q99541 437 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 SMOQ99835 787 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 STRADBQ9C0K7 418 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 NEUROG2Q9H2A3 272 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 OLA1Q9NTK5 396 aaKnown RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KLHL11Q9NVR0 708 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ZDHHC3Q9NYG2 299 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-207ENST00000520168 GGA2Q9UJY4 613 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 STOML2Q9UJZ1 356 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 KIF3AQ9Y496 699 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 NME7Q9Y5B8 376 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 CSNK1G3Q9Y6M4 447 aa5.07□□□□□ -1.6
SDCBP-207ENST00000520168 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZFHX3Q15911 3703 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ITIH6Q6UXX5 1313 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZFC3H1O60293 1989 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PRRC2CQ9Y520 2896 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 EME2A4GXA9 379 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 GOLGA8IPA6NC78 632 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 GOLGA8JA6NMD2 632 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TPP1O14773 563 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PLD2O14939 933 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 NVLO15381 856 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 FFAR2O15552 330 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 IRAK2O43187 625 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PLRG1O43660 514 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PIAS2O75928 621 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 MOCS3O95396 460 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 BMP15O95972 392 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SRPRAP08240 638 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TGM2P21980 687 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms