RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 MCF2LO15068 1137 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SYNCRIPO60506 623 aaKnown RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 FOXD2O60548 495 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SRGAP2O75044 1071 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 EPN2O95208 641 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SRCP12931 536 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 IL4RP24394 825 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 EPHB2P29323 1055 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 DPP6P42658 865 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 ST8SIA6P61647 398 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 ARF5P84085 180 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SIM2Q14190 667 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 CA9Q16790 459 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 FNDC3BQ53EP0 1204 aaKnown RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 INO80DQ53TQ3 878 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SLC36A4Q6YBV0 504 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 RFX8Q6ZV50 586 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 TFAP2DQ7Z6R9 452 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 LZTR1Q8N653 840 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 CADM4Q8NFZ8 388 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SLC35G2Q8TBE7 412 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 MYO1AQ9UBC5 1043 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 MBD1Q9UIS9 605 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 TPX2Q9ULW0 747 aaKnown RBP11.8□□□□□ -0.52
SPIDR-212ENST00000519661 RAD54BQ9Y620 910 aa11.8□□□□□ -0.52
SPIDR-212ENST00000519661 DCLK1O15075 740 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PJA2O43164 708 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 KDELR3O43731 214 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 RAMP2O60895 175 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SIN3BO75182 1162 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 NDUFA10O95299 355 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 RARAP10276 462 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 HLA-EP13747 358 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 TCF4P15884 667 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 OXTRP30559 389 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 NNMTP40261 264 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SLC1A1P43005 524 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PXNP49023 591 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 TPMTP51580 245 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 RPS14P62263 151 aaKnown RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SERINC3Q13530 473 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 ZNF776Q68DI1 518 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 HEATR6Q6AI08 1181 aaKnown RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SCYL2Q6P3W7 929 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 KBTBD6Q86V97 674 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 ARHGAP12Q8IWW6 846 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 OR2A12Q8NGT7 310 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PRCCQ92733 491 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 FATE1Q969F0 183 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SIPA1Q96FS4 1042 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 ZNF419Q96HQ0 510 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SPACA7Q96KW9 195 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 KCTD15Q96SI1 283 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 ZNF670Q9BS34 389 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PDFQ9HBH1 243 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 WSB2Q9NYS7 404 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 CWC15Q9P013 229 aaKnown RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 PPM1HQ9ULR3 514 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 FZD4Q9ULV1 537 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 EPN1Q9Y6I3 576 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-212ENST00000519661 SPAG17Q6Q759 2223 aa11.79□□□□□ -0.52
SPIDR-212ENST00000519661 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TTC34A8MYJ7 566 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 SLC7A4O43246 635 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 GFRA3O60609 400 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 SNAP91O60641 907 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 RHOBTB1O94844 696 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 MT-CO1P00395 513 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 KRT7P08729 469 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 CYLC1P35663 651 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 WASP42768 502 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 STK19P49842 368 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TPI1P60174 286 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 SRSF5Q13243 272 aaKnown RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 PDK2Q15119 407 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 ELF2Q15723 593 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TAZQ16635 292 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TXNRD3NBQ6F5E7 133 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 LRRC49Q8IUZ0 686 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TMIEQ8NEW7 156 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 OR7D4Q8NG98 312 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 DNASE2BQ8WZ79 361 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 LRIG1Q96JA1 1093 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 CSPG4P5Q96PW8 444 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 TPSD1Q9BZJ3 242 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms