RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 UBA5Q9GZZ9 404 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 IL21RQ9HBE5 538 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 TLR8Q9NR97 1041 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 TMEM45AQ9NWC5 275 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 PPP1R14DQ9NXH3 145 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FBXO4Q9UKT5 387 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 AGO2Q9UKV8 859 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 DHDHQ9UQ10 334 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 LAMP3Q9UQV4 416 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 OSGIN2Q9Y236 505 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 TCRBV7S3A2A0A539 114 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 OR6C68A6NDL8 312 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 CXorf65A6NEN9 183 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 GAGE10A6NGK3 116 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 A6NLC8 198 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 SH3BP5O60239 455 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 WNT1P04628 370 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 CHRM4P08173 479 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 PRR35P0CG20 571 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 FCGR2AP12318 317 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 CD53P19397 219 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 SSBP2P81877 361 aaPredicted RBP4.87□□□□□ -1.63
SQLE-202ENST00000518604 IL13RA2Q14627 380 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
SQLE-202ENST00000518604 SRSF7Q16629 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
SQLE-202ENST00000518604 ARL13AQ5H913 290 aaPredicted RBP4.87□□□□□ -1.63
SQLE-202ENST00000518604 MORN5Q5VZ52 161 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 RNF144BQ7Z419 303 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 CNGA4Q8IV77 575 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 SCAIQ8N9R8 606 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 SLC44A5Q8NCS7 719 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 PRSS3P2Q8NHM4 247 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 HDAC7Q8WUI4 952 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 DDB2Q92466 427 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 MPP4Q96JB8 637 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 IFT27Q9BW83 186 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 SCNM1Q9BWG6 230 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 PHF7Q9BWX1 381 aaPredicted RBP4.87□□□□□ -1.63
SQLE-202ENST00000518604 ACAD9Q9H845 621 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 RNF146Q9NTX7 359 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 HCN3Q9P1Z3 774 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 UPB1Q9UBR1 384 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 HSF4Q9ULV5 492 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 FRMD4BQ9Y2L6 1034 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 CLDN16Q9Y5I7 305 aa4.87□□□□□ -1.63
SQLE-202ENST00000518604 TRBV5-3A0A0A0MS03 114 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 KCNU1A8MYU2 1149 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 FOXO6A8MYZ6 492 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 J3KRW8 73 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 RHODO00212 210 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 TLX3O43711 291 aaPredicted RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 UGDHO60701 494 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 NEURL1O76050 574 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 HNRNPA1P09651 372 aaKnown RBP eCLIP4.86□□□□□ -1.63
SQLE-202ENST00000518604 ELF1P32519 619 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 CIITAP33076 1130 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 SLC16A2P36021 539 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 ARHGAP25P42331 645 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 TUBP50607 506 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 C21orf58P58505 322 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 ZNF91Q05481 1191 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 G3BP1Q13283 466 aaKnown RBP eCLIP4.86□□□□□ -1.63
SQLE-202ENST00000518604 GPR68Q15743 365 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 NFIL3Q16649 462 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 AP5B1Q2VPB7 878 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 SUPT20HL1Q3ZLR7 823 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 MIDNQ504T8 468 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 SH2D4BQ5SQS7 431 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 AAGABQ6PD74 315 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 ADGRG6Q86SQ4 1221 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 DDIASQ8IXT1 998 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 FAM185AQ8N0U4 392 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 SETD9Q8NE22 299 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 ST8SIA4Q92187 359 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 KAT2AQ92830 837 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 COQ8BQ96D53 544 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 WDR83Q9BRX9 315 aaKnown RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 FRMD8Q9BZ67 464 aaPredicted RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 INTS2Q9H0H0 1204 aaKnown RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 ACTR5Q9H9F9 607 aaPredicted RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 BEX4Q9NWD9 120 aaPredicted RBP4.86□□□□□ -1.63
SQLE-202ENST00000518604 UTS2RQ9UKP6 389 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 CYP46A1Q9Y6A2 500 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 MST1RQ04912 1400 aa4.86□□□□□ -1.63
SQLE-202ENST00000518604 TEX22C9J3V5 150 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 EPB41L2O43491 1005 aaKnown RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 LIFRP42702 1097 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 RPP30P78346 268 aaKnown RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 PMPCAQ10713 525 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 DDX10Q13206 875 aaKnown RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 NAA25Q14CX7 972 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 SLC18A3Q16572 532 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 ALG10Q5BKT4 473 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 ALG10BQ5I7T1 473 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 C10orf25Q5T742 122 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 DPY19L2P1Q6NXN4 242 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 ANKRD13BQ86YJ7 626 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms