RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 KPNA3O00505 521 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 KCNK3O14649 394 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 HYAL3O43820 417 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ATP9BO43861 1147 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 RTN2O75298 545 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 TOP3BO95985 862 aaKnown RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 CYP1A1P04798 512 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 CALB1P05937 261 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 IGHV4-34P06331 123 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 KRT3P12035 628 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 RRM1P23921 792 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 MAT2AP31153 395 aaKnown RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 GRIA4P48058 902 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 DNA2P51530 1060 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 METAP1P53582 386 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ADPRHP54922 357 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 FAM193AP78312 1265 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 BNC1Q01954 994 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 SLC14A1Q13336 389 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 HNRNPDQ14103 355 aaKnown RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 CLEC16AQ2KHT3 1053 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 CCDC157Q569K6 752 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 SETD3Q86TU7 594 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ZNF354CQ86Y25 554 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 DCAF4L2Q8NA75 395 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 OR7D4Q8NG98 312 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 PIP4K2CQ8TBX8 421 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 GRIN3AQ8TCU5 1115 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 FAM172AQ8WUF8 416 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 NT5C3BQ969T7 300 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ALG14Q96F25 216 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 SERAC1Q96JX3 654 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 PCDHB18PQ96TA0 734 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ZYG11BQ9C0D3 744 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 TNKS2Q9H2K2 1166 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ATP13A1Q9HD20 1204 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 DYRK4Q9NR20 520 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 OR51B4Q9Y5P0 310 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 PCDH15Q96QU1 1955 aa10.84□□□□□ -0.67
SPIDR-205ENST00000518060 ASCC3Q8N3C0 2202 aaKnown RBP10.83□□□□□ -0.68
SPIDR-205ENST00000518060 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 K7ERQ8 282 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 ALOX15BO15296 676 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 GJB3O75712 270 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 MT-CO1P00395 513 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 CCDC172P0C7W6 258 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SRCP12931 536 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 FERP16591 822 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 DESP17661 470 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 GPD1P21695 349 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 GLDCP23378 1020 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 CCT8P50990 548 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 PPP2CBP62714 309 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 PPP2CAP67775 309 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SHC2P98077 582 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 CNTN1Q12860 1018 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 NCAPHQ15003 741 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SUZ12Q15022 739 aaKnown RBP10.83□□□□□ -0.68
SPIDR-205ENST00000518060 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 C5orf22Q49AR2 442 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 FILIP1LQ4L180 1135 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 RAB6CQ53S08 254 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SLC45A4Q5BKX6 768 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 RETSATQ6NUM9 610 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SCYL2Q6P3W7 929 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 C22orf39Q6P5X5 142 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 ZNF683Q8IZ20 524 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 RYBPQ8N488 228 aaPredicted RBP10.83□□□□□ -0.68
SPIDR-205ENST00000518060 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 C1orf74Q96LT6 269 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 MCEEQ96PE7 176 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 ERGIC2Q96RQ1 377 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 PSMB7Q99436 277 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 AGPAT1Q99943 283 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 SCNM1Q9BWG6 230 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 RAB6CQ9H0N0 254 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 ADAMTS1Q9UHI8 967 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 CEP192Q8TEP8 1941 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 ADAMTS9Q9P2N4 1935 aa10.83□□□□□ -0.68
SPIDR-205ENST00000518060 PI4KAP42356 2102 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 NUMA1Q14980 2115 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 IGLV3-10A0A075B6K4 115 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 C2CD4BA6NLJ0 364 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 DRGXA6NNA5 263 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 SMTNL1A8MU46 457 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 TMCO5BA8MYB1 307 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 H0Y8X5 98 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 MCF2LO15068 1137 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 FLRT2O43155 660 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 SLC7A4O43246 635 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 SMAD6O43541 496 aaKnown RBP10.82□□□□□ -0.68
SPIDR-205ENST00000518060 FTH1P19P0C7X4 201 aa10.82□□□□□ -0.68
SPIDR-205ENST00000518060 UNGP13051 313 aaPredicted RBP10.82□□□□□ -0.68
SPIDR-205ENST00000518060 CHRNA3P32297 505 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms