RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ERVK-10P10266 1014 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 MAGEA9P43362 315 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 CDH17Q12864 832 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 LACTB2Q53H82 288 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 TRPM8Q7Z2W7 1104 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 SPATA22Q8NHS9 363 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 ZNF669Q96BR6 464 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 ZNF419Q96HQ0 510 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 IGSF21Q96ID5 467 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 PLCD4Q9BRC7 762 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 UBE2OQ9C0C9 1292 aaKnown RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 IL22Q9GZX6 179 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 CCSER2Q9H7U1 834 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 TMEM248Q9NWD8 314 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 MKS1Q9NXB0 559 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 DONSONQ9NYP3 566 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 BACE2Q9Y5Z0 518 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 IGLV3-10A0A075B6K4 115 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 ATP9BO43861 1147 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 ANXA9O76027 345 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 RPL17P18621 184 aaKnown RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 OR1D2P34982 312 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 NDST2P52849 883 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 CDHR3Q6ZTQ4 885 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 TFAP2DQ7Z6R9 452 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 TTLL2Q9BWV7 592 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 VN1R3Q9BXE9 311 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 RBM22Q9NW64 420 aaKnown RBP eCLIP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 ZFATQ9P243 1243 aa27.07■■□□□ 1.92
COL13A1-210ENST00000517713 IPO11Q9UI26 975 aaKnown RBP27.07■■□□□ 1.92
COL13A1-210ENST00000517713 RING1Q06587 406 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 FRG1Q14331 258 aaKnown RBP27.06■■□□□ 1.92
COL13A1-210ENST00000517713 ANO4Q32M45 955 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 ANKRD20A4Q4UJ75 823 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 RAP1GAP2Q684P5 730 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 CHSY1Q86X52 802 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 CCDC63Q8NA47 563 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 SLC13A1Q9BZW2 595 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 CRISPLD2Q9H0B8 497 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 MANSC1Q9H8J5 431 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 IL1RAPL1Q9NZN1 696 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 PLLPQ9Y342 182 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 FAM237BA0A1B0GVD1 139 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 TLR5O60602 858 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 CNTN5O94779 1100 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 TPH1P17752 444 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 TUFMP49411 452 aaKnown RBP27.06■■□□□ 1.92
COL13A1-210ENST00000517713 ALFQ53S48 1182 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 C1orf53Q5VUE5 145 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 FBXL22Q6P050 247 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 RNF168Q8IYW5 571 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-210ENST00000517713 PPP1R2P1Q96PQ5 205 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 ACTR5Q9H9F9 607 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-210ENST00000517713 TBX21Q9UL17 535 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 PSAT1Q9Y617 370 aa27.06■■□□□ 1.92
COL13A1-210ENST00000517713 MT-CYBP00156 380 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-210ENST00000517713 HLA-DQB2P05538 268 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 DNAJB2P25686 324 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 SPRED3Q2MJR0 410 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 ACBD5Q5T8D3 534 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-210ENST00000517713 KIAA1841Q6NSI8 718 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 NDUFAF2Q8N183 169 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 IGSF8Q969P0 613 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 CEP295NLQ96MC4 621 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 TBL1YQ9BQ87 522 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 ALG13Q9NP73 1137 aaKnown RBP27.05■■□□□ 1.92
COL13A1-210ENST00000517713 PCMTD2Q9NV79 361 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 KLHL14Q9P2G3 628 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 ATP11BQ9Y2G3 1177 aa27.05■■□□□ 1.92
COL13A1-210ENST00000517713 ZCWPW2A0A1B0GU75 182 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 NEBLO76041 1014 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 KPNA1P52294 538 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-210ENST00000517713 GEMP55040 296 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 SMAD1Q15797 465 aaKnown RBP27.04■■□□□ 1.92
COL13A1-210ENST00000517713 ABCF3Q9NUQ8 709 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 TXNDC16Q9P2K2 825 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 SOX13Q9UN79 622 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 DRGXA6NNA5 263 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 C2CD2LO14523 706 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 FSBPO95073 299 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 ACTN3Q08043 901 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-210ENST00000517713 CNPY4Q8N129 248 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 VWCEQ96DN2 955 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 HMCESQ96FZ2 354 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 CHRAC1Q9NRG0 131 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 TMEM39AQ9NV64 488 aa27.04■■□□□ 1.92
COL13A1-210ENST00000517713 CRHR1P34998 444 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 SERPINB4P48594 390 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 SPOUT1Q5T280 376 aaKnown RBP27.03■■□□□ 1.92
COL13A1-210ENST00000517713 OTOAQ7RTW8 1153 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 IPMKQ8NFU5 416 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 MFSD3Q96ES6 412 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 CDK5RAP1Q96SZ6 601 aaKnown RBP27.03■■□□□ 1.92
COL13A1-210ENST00000517713 CPNE1Q99829 537 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 DOCK4Q8N1I0 1966 aa27.03■■□□□ 1.92
COL13A1-210ENST00000517713 GP5P40197 560 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 GRTP1Q5TC63 336 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 RNF43Q68DV7 783 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 ACMSDQ8TDX5 336 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms