RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 VPS39Q96JC1 886 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MAELQ96JY0 434 aaKnown RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CLPTM1LQ96KA5 538 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TNIP3Q96KP6 325 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 KCNK16Q96T55 309 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MYCBPQ99417 103 aaPredicted RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 AGAP2Q99490 1192 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CPNE1Q99829 537 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PAIP2Q9BPZ3 127 aaKnown RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SIKE1Q9BRV8 207 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 BTBD10Q9BSF8 475 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 KIFC1Q9BW19 673 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 KATNAL1Q9BW62 490 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 WWP1Q9H0M0 922 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 C1orf21Q9H246 121 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CXorf56Q9H5V9 222 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CAB39LQ9H9S4 337 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NMUR1Q9HB89 426 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MRM3Q9HC36 420 aaKnown RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GPAMQ9HCL2 828 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TNFRSF12AQ9NP84 129 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PRDM5Q9NQX1 630 aaPredicted RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NDFIP2Q9NV92 336 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 STX18Q9P2W9 335 aaKnown RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MARCOQ9UEW3 520 aaPredicted RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CPA4Q9UI42 421 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CDH9Q9ULB4 789 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 VANGL2Q9ULK5 521 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DNAJC16Q9Y2G8 782 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 STK38LQ9Y2H1 464 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MTO1Q9Y2Z2 717 aaKnown RBP3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 Q9Y3F1 56 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 LRRC42Q9Y546 428 aa3.32□□□□□ -1.88
SCARNA20.6-201ENST00000517251 C5orf42Q9H799 3197 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NUP210LQ5VU65 1888 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IGLV3-10A0A075B6K4 115 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IQCA1LA6NCM1 817 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CASTOR2A6NHX0 329 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TMEM114B3SHH9 223 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 F8W8V4 182 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 H0Y3Z8 333 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 I3L4J1 428 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CASQ2O14958 399 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DYNC1LI2O43237 492 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MSI1O43347 362 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GRID2O43424 1007 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CREB3O43889 395 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MAFKO60675 156 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CCDC22O60826 627 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HUS1O60921 280 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZNF623O75123 536 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DUSP11O75319 330 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZNF189O75820 626 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EFEMP2O95967 443 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CAPNS1P04632 268 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ENO1P06733 434 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CHRNGP07510 517 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MYL3P08590 195 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 C6orf222P0C671 652 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 USP17L7P0C7H9 530 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ATXN1LP0C7T5 689 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SMIM18P0DKX4 95 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MYL4P12829 197 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 AKR1A1P14550 325 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 KCNA5P22460 613 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SP100P23497 879 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 YY1P25490 414 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HOXD9P28356 352 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PRDX6P30041 224 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HTR7P34969 479 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MAP2K2P36507 400 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GNL1P36915 607 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC1A2P43004 574 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CHRNA4P43681 627 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 BRCC3P46736 316 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC1A6P48664 564 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IDH3AP50213 366 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZNF135P52742 658 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC5A3P53794 718 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 AQP5P55064 265 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 INHBCP55103 352 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SESN2P58004 480 aaPredicted RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACTR3P61158 418 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ABCE1P61221 599 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TMPRSS15P98073 1019 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MPP1Q00013 466 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CDC42EP1Q00587 391 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TIAL1Q01085 375 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CREB5Q02930 508 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACVR1Q04771 509 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SULT2A1Q06520 285 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GRIK3Q13003 919 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRIM32Q13049 653 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MPP3Q13368 585 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PEX6Q13608 980 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HNRNPDQ14103 355 aaKnown RBP3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 RCN2Q14257 317 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZNF460Q14592 562 aa3.31□□□□□ -1.88
SCARNA20.6-201ENST00000517251 LPIN1Q14693 890 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms