RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 HERC6Q8IVU3 1022 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATPAF2Q8N5M1 289 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TEX26Q8N6G2 289 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GSDMBQ8TAX9 411 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DENND1AQ8TEH3 1009 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TTC17Q96AE7 1141 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TADA1Q96BN2 335 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 STAMBPL1Q96FJ0 436 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 HMCESQ96FZ2 354 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 OXNAD1Q96HP4 312 aaPredicted RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZFRQ96KR1 1074 aaKnown RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PPP1R2P1Q96PQ5 205 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 KLHL5Q96PQ7 755 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PAFAH2Q99487 392 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MCOLN1Q9GZU1 580 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 EPN3Q9H201 632 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCDC134Q9H6E4 229 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LRRC40Q9H9A6 602 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GLOD4Q9HC38 313 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZNF334Q9HCZ1 680 aaPredicted RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SSU72Q9NP77 194 aaKnown RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RBM22Q9NW64 420 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SENP1Q9P0U3 644 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PSMC3IPQ9P2W1 217 aaPredicted RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PRKAG2Q9UGJ0 569 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TBK1Q9UHD2 729 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RSPH14Q9UHP6 348 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 IPO11Q9UI26 975 aaKnown RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZNF180Q9UJW8 692 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 AAR2Q9Y312 384 aaKnown RBP5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATG2AQ2TAZ0 1938 aa5.54□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FAM237BA0A1B0GVD1 139 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 A0A1W2PPM1 405 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TMEM120BA0PK00 339 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MAGEB16A2A368 324 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GMNCA6NCL1 334 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 C2orf71A6NGG8 1288 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZBBXA8MT70 800 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 C5orf67F2Z3F1 127 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 F5H423 210 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 F5H5T6 163 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 J3KR12 359 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 AP3B1O00203 1094 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TYROBPO43914 113 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PRAMEF11O60813 436 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PIAS1O75925 651 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LATS1O95835 1130 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CPP00450 1065 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 HLA-DQB2P05538 268 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MMP2P08253 660 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SPATA31D3P0C874 917 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 BRAFP15056 766 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PFKLP17858 780 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PGAM1P18669 254 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 NFKB1P19838 968 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DNAJB2P25686 324 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MGAT1P26572 445 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 OR1E1P30953 314 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CORO1AP31146 461 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RENBPP51606 427 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GEMP55040 296 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CDH4P55283 916 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SESN2P58004 480 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ERVFC1P60507 584 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CRADDP78560 199 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZXDBP98169 803 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLC18A2Q05940 514 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 IL10RBQ08334 325 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 NIPAL4Q0D2K0 466 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MSLNQ13421 630 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 OLIG2Q13516 323 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SPARCL1Q14515 664 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PRPSAP1Q14558 356 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TMED2Q15363 201 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TAF12Q16514 161 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ANO4Q32M45 955 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ADGRF1Q5T601 910 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 NAPEPLDQ6IQ20 393 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DENND5AQ6IQ26 1287 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RFWD3Q6PCD5 774 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TRMT10BQ6PF06 316 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RANBP10Q6VN20 620 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 Q6ZNB5 142 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SPATA31D4Q6ZUB0 917 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCDC149Q6ZUS6 474 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CHST9Q7L1S5 443 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TFAP2DQ7Z6R9 452 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LINC00523Q86TU6 105 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLC26A11Q86WA9 606 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LRRC6Q86X45 466 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CHSY1Q86X52 802 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TMC8Q8IU68 726 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DENND1CQ8IV53 801 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCDC117Q8IWD4 279 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FAM217AQ8IXS0 508 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SRRM1Q8IYB3 904 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LGI2Q8N0V4 545 aa5.53□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MRPL43Q8N983 215 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms