RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 VWA5B1Q5TIE3 1220 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HEPHL1Q6MZM0 1159 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PRSS57Q6UWY2 283 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HORMAD2Q8N7B1 307 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FAM110DQ8TAY7 271 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CLEC4CQ8WTT0 213 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC35F5Q8WV83 523 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RSC1A1Q92681 617 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DUX5Q96PT3 197 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MECRQ9BV79 373 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IFT27Q9BW83 186 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCGF6Q9BYE7 350 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TRIM31Q9BZY9 425 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TP63Q9H3D4 680 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CHPF2Q9P2E5 772 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PKP3Q9Y446 797 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCDHA10Q9Y5I2 948 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SRPRBQ9Y5M8 271 aaKnown RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PLSCR5A0PG75 271 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 AGAP5A6NIR3 686 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SLC38A8A6NNN8 435 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 I6L893 689 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LINC01565O15544 149 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ASNA1O43681 348 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KIF1CO43896 1103 aaKnown RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CCNT1O60563 726 aaKnown RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CAND2O75155 1236 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ZBTB11O95625 1053 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ENO3P13929 434 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 NAGAP17050 411 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TECP42680 631 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RFX5P48382 616 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 NUDT6P53370 316 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 FAM3BP58499 235 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 STARD3Q14849 445 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 BTBD16Q32M84 506 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 Q6ZSV7 163 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 H1FNTQ75WM6 255 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ADAMTS14Q8WXS8 1223 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KIAA1191Q96A73 305 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 APOLD1Q96LR9 279 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RETREG1Q9H6L5 497 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ZDHHC7Q9NXF8 308 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 IGSF9Q9P2J2 1179 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CDH22Q9UJ99 828 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 BAG5Q9UL15 447 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CNTN6Q9UQ52 1028 aa3.08□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LOC102724159A0A0B4J2E5 919 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C17orf102A2RUQ5 167 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CLEC18AA5D8T8 446 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SMTNL1A8MU46 457 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 EYA2O00167 538 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 GRID2O43424 1007 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KCNJ13O60928 360 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KRT18P05783 430 aaKnown RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 UNGP13051 313 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ABCB4P21439 1286 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RFC1P35251 1148 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PPP3CCP48454 512 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 AMTP48728 403 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CLCN5P51795 746 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CDH12P55289 794 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ERVFC1-1P60608 527 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ZBTB16Q05516 673 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 COASYQ13057 564 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ALKBH1Q13686 389 aaKnown RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PWP2Q15269 919 aaKnown RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KIF19Q2TAC6 998 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 OTUD3Q5T2D3 398 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TMEM268Q5VZI3 342 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C8orf82Q6P1X6 216 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 GSG1LQ6UXU4 331 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 MON1BQ7L1V2 547 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C16orf82Q7Z2V1 217 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CLIP4Q8N3C7 705 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CLEC18CQ8NCF0 446 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CEP76Q8TAP6 659 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 FAM216AQ8WUB2 273 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CPT1BQ92523 772 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KCNJ9Q92806 393 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C18orf8Q96DM3 657 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SLITRK1Q96PX8 696 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 NPAS1Q99742 590 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C1QTNF4Q9BXJ3 329 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KLHL31Q9H511 634 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ARFGAP3Q9NP61 516 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 GEMIN8Q9NWZ8 242 aaKnown RBP3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PHTF1Q9UMS5 762 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 DOCK7Q96N67 2140 aa3.07□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 GOLGA6L3A6NEY3 463 aa3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SLC16A5O15375 505 aa3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RNMTO43148 476 aaKnown RBP3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ITM2AO43736 263 aa3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SERPINI2O75830 405 aa3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PARNO95453 639 aaKnown RBP3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 MMP3P08254 477 aa3.06□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ITGA2BP08514 1039 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms