RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 AREL1O15033 823 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TRUB2O95900 331 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 NDUFB10O96000 172 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 NAT2P11245 290 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TYK2P29597 1187 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 HLCSP50747 726 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RPL14P50914 215 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 MPP1Q00013 466 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 GNA12Q03113 381 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 FSTL1Q12841 308 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SPCS2Q15005 226 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 HMBOX1Q6NT76 420 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 KRT27Q7Z3Y8 459 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ZC3H7AQ8IWR0 971 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 GOLM1Q8NBJ4 401 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ISL2Q96A47 359 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 MAGED4Q96JG8 741 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 C9orf16Q9BUW7 83 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RAD21L1Q9H4I0 556 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SMOXQ9NWM0 555 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 MYH9P35579 1960 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TCAF2A6NFQ2 919 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 SOCS2O14508 198 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 RGS13O14921 159 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TRIM24O15164 1050 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ENTPD3O75355 529 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 GMNNO75496 209 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 APOA4P06727 396 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 MLNP12872 115 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 FGFR3P22607 806 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 HSD17B4P51659 736 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 NRLP54845 237 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 CD300CQ08708 224 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 PRKAA1Q13131 559 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 CPNE9Q8IYJ1 553 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 SLC39A3Q9BRY0 314 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 NAT9Q9BTE0 207 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 MRPL11Q9Y3B7 192 aaKnown RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 PCDHGA7Q9Y5G6 932 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 CENPBD1B2RD01 187 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 STX16-NPEPL1H3BU86 382 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TNFRSF10AO00220 468 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 SEC14L2O76054 403 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 MPOP05164 745 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 MAGEA12P43365 314 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 EIF2B5Q13144 721 aaKnown RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 GRTP1Q5TC63 336 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 GPAT2Q6NUI2 795 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 NPNTQ6UXI9 565 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 RDH11Q8TC12 318 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 CALML6Q8TD86 181 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 SH3YL1Q96HL8 342 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 USP18Q9UMW8 372 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
SMAD1-215ENST00000515385 ANKRD34BA5PLL1 514 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 DDX39AO00148 427 aaKnown RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 SLC22A1O15245 554 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 CLOCKO15516 846 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 KRT75O95678 551 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 NTRK1P04629 796 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 TCN1P20061 433 aaPredicted RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 MIPP30301 263 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 SNX17Q15036 470 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 SAMD4BQ5PRF9 694 aaKnown RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 BRINP3Q76B58 766 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 ZNF534Q76KX8 674 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 WDTC1Q8N5D0 677 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 TRIM15Q9C019 465 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 WDR55Q9H6Y2 383 aaPredicted RBP13.02□□□□□ -0.33
SMAD1-215ENST00000515385 TRAF6Q9Y4K3 522 aa13.02□□□□□ -0.33
SMAD1-215ENST00000515385 G3V2L1 256 aa13.01□□□□□ -0.33
SMAD1-215ENST00000515385 MYO1DO94832 1006 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms