RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ZCCHC23Q6ZST2 131 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 CLEC14AQ86T13 490 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 SAPCD2Q86UD0 394 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 C10orf107Q8IVU9 208 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 ARHGAP18Q8N392 663 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
NUP54-217ENST00000514987 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
NUP54-217ENST00000514987 IL12RB2Q99665 862 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 RHOBTB2Q9BYZ6 727 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 BATF3Q9NR55 127 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 TMLHEQ9NVH6 421 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 STOML1Q9UBI4 398 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 CDY1Q9Y6F8 540 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 PTPRDP23468 1912 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 A0A096LPK6 155 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 C2orf71A6NGG8 1288 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 CA12O43570 354 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 CABYRO75952 493 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 EOMESO95936 686 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 SLC2A3P11169 496 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 COL6A2P12110 1019 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 KCNA4P22459 653 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 ELF1P32519 619 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
NUP54-217ENST00000514987 HSP90AA5PQ58FG0 334 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 CMPK2Q5EBM0 449 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 C6orf163Q5TEZ5 329 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 MANEALQ5VSG8 457 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 PKN3Q6P5Z2 889 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 POTEHQ6S545 545 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 TTC7BQ86TV6 843 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.13■□□□□ 0.01
NUP54-217ENST00000514987 DCP1BQ8IZD4 617 aaKnown RBP15.13■□□□□ 0.01
NUP54-217ENST00000514987 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 OR10T2Q8NGX3 314 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 TBL1YQ9BQ87 522 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 MCMBPQ9BTE3 642 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 C20orf27Q9GZN8 174 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 MRM3Q9HC36 420 aaKnown RBP15.13■□□□□ 0.01
NUP54-217ENST00000514987 GLOD4Q9HC38 313 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 ENTPD7Q9NQZ7 604 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 SNX10Q9Y5X0 201 aa15.13■□□□□ 0.01
NUP54-217ENST00000514987 WASH4PA8MWX3 477 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 F8W8V4 182 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 TNFRSF10BO14763 440 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 PAGE1O75459 146 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 LUC7L3O95232 432 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 PRKCGP05129 697 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 ENO1P06733 434 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 GRIK1P39086 918 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 SLC5A3P53794 718 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 ZRSR2Q15696 482 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 KCNA10Q16322 511 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 PPM1JQ5JR12 505 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 GLB1LQ6UWU2 654 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 ZNF598Q86UK7 904 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 LRRTM3Q86VH5 581 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 CNTD1Q8N815 330 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 PPHLN1Q8NEY8 458 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 OR6Y1Q8NGX8 325 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 GABPB2Q8TAK5 448 aaPredicted RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 FATE1Q969F0 183 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 MFSD3Q96ES6 412 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 PRR11Q96HE9 360 aaPredicted RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 CELF6Q96J87 481 aaKnown RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 C1orf74Q96LT6 269 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 SERPINB11Q96P15 392 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 GPR22Q99680 433 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 SIK2Q9H0K1 926 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 RHOJQ9H4E5 214 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 CHRAC1Q9NRG0 131 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 ARMCX1Q9P291 453 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 MARCOQ9UEW3 520 aaPredicted RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 TLK1Q9UKI8 766 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 NEU3Q9UQ49 428 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 NOD1Q9Y239 953 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 INPP5FQ9Y2H2 1132 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 PCDHB12Q9Y5F1 795 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 NLRC5Q86WI3 1866 aa15.12■□□□□ 0.01
NUP54-217ENST00000514987 FNDC1Q4ZHG4 1894 aaPredicted RBP15.12■□□□□ 0.01
NUP54-217ENST00000514987 TMEM189-UBE2V1I3L0A0 370 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 DFFAO00273 331 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 CIB2O75838 187 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TOP3BO95985 862 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 GM2AP17900 193 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 PAMP19021 973 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 CTGFP29279 349 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TM4SF4P48230 202 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 ALDH18A1P54886 795 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 NFE2Q16621 373 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 PAN2Q504Q3 1202 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 ACBD5Q5T8D3 534 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 METTL21CQ5VZV1 264 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 AFMIDQ63HM1 303 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 ARHGAP12Q8IWW6 846 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 STON2Q8WXE9 905 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms