RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ENTPD5O75356 428 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PGM3O95394 542 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 RECKO95980 971 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 CSTF2P33240 577 aaKnown RBP eCLIP7.62□□□□□ -1.192e-6■■□□□ 13.9
PDLIM5-219ENST00000514743 NSFP46459 744 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 MASP1P48740 699 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ETV1P50549 477 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ATN1P54259 1190 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 KRT17Q04695 432 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TRPC3Q13507 836 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ACAP2Q15057 778 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 LY6KQ17RY6 165 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 RGS21Q2M5E4 152 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GALNTL6Q49A17 601 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 DBX2Q6ZNG2 339 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ALLCQ8N6M5 410 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PPP4R1Q8TF05 950 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TMEM109Q9BVC6 243 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 CCDC106Q9BWC9 280 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TRIM15Q9C019 465 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 DCLK3Q9C098 648 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SPATC1LQ9H0A9 340 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 AZI2Q9H6S1 392 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GPRC5BQ9NZH0 403 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 VPS4AQ9UN37 437 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 APOBEC2Q9Y235 224 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 IGKV6-21A0A0C4DH24 114 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SH3D21A4FU49 640 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TRIM77I1YAP6 450 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 APBB3O95704 486 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ASS1P00966 412 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 RARGP13631 454 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 APEHP13798 732 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 RAC2P15153 192 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TCF4P15884 667 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 STAT5BP51692 787 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 POU6F2P78424 691 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PTK6Q13882 451 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TRIP13Q15645 432 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 VARS2Q5ST30 1063 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PIGWQ7Z7B1 504 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 UTP4Q969X6 686 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 REXO5Q96IC2 774 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 RHOBTB2Q9BYZ6 727 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 BRD9Q9H8M2 597 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 MLXIPLQ9NP71 852 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 FETUBQ9UGM5 382 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TEKT2Q9UIF3 430 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TRIP11Q15643 1979 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 RAB19A4D1S5 217 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PSTPIP1O43586 416 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 BMP10O95393 424 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 GAS8O95995 478 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 GLAP06280 429 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ATP5BP06576 529 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PROZP22891 400 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PCSK6P29122 969 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 STX2P32856 288 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 IDUAP35475 653 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 MMP13P45452 471 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ALDH18A1P54886 795 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 CSNK2BP67870 215 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 SNTA1Q13424 505 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 NCOA4Q13772 614 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 EFTUD2Q15029 972 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PARP6Q2NL67 630 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 AAGABQ6PD74 315 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 METTL7BQ6UX53 244 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ZPBP2Q6X784 338 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 DDI1Q8WTU0 396 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ATXN2LQ8WWM7 1075 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 VCPIP1Q96JH7 1222 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ARL5BQ96KC2 179 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 FAM118BQ9BPY3 351 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 EPS8L2Q9H6S3 715 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 TXLNGQ9NUQ3 528 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 INTS7Q9NVH2 962 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 WHRNQ9P202 907 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 UBA2Q9UBT2 640 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ENOPH1Q9UHY7 261 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 DMTF1Q9Y222 760 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 RALGAPA2Q2PPJ7 1873 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 A0A0G2JLL6 359 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 MAGEB16A2A368 324 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ITGB3P05106 788 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 RALAP11233 206 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 STT3AP46977 705 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 RPL7AP62424 266 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PHC1P78364 1004 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 IFITM2Q01629 132 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 LRRC14Q15048 493 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 HSDL1Q3SXM5 330 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ALG1LQ6GMV1 187 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 CRTC1Q6UUV9 634 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 TRIM72Q6ZMU5 477 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms