RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TTLL3Q9Y4R7 772 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 GRXCR1A8MXD5 290 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 POC1B-GALNT4F8VUJ3 575 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 SPAG6O75602 509 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 LRG1P02750 347 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 GABRR2P28476 465 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 OR1E1P30953 314 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 IFNAR2P48551 515 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 MAPKAPK2P49137 400 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 SGSHP51688 502 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 UBE3AQ05086 875 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 C9orf50Q5SZB4 431 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 ADGRF1Q5T601 910 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 RIBC1Q8N443 379 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 ARL14EPQ8N8R7 260 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 OR52K2Q8NGK3 314 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 SLC22A17Q8WUG5 538 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 PIH1D1Q9NWS0 290 aaKnown RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 TBK1Q9UHD2 729 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
PVT1-203ENST00000513868 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
PVT1-203ENST00000513868 SDR42E2A6NKP2 422 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 ERI2A8K979 691 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 GRM6O15303 877 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 USP12O75317 370 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 CSPG5O95196 566 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 GLUD1P00367 558 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 IRF1P10914 325 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 CREB1P16220 341 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 IRS1P35568 1242 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 ACVRL1P37023 503 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 GEMIN4P57678 1058 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 YBEYP58557 167 aaPredicted RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 RPS24P62847 133 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 CRADDP78560 199 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 CYP4F8P98187 520 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 SERINC3Q13530 473 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 PARP15Q460N3 678 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 PRPF39Q86UA1 669 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 OR52K1Q8NGK4 314 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 ARHGEF2Q92974 986 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 CFAP36Q96G28 342 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 FCRL5Q96RD9 977 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 STMN4Q9H169 189 aaPredicted RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
PVT1-203ENST00000513868 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 PPCSQ9HAB8 311 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 GLOD4Q9HC38 313 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 TRPC7Q9HCX4 862 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 SLC24A2Q9UI40 661 aa13.11□□□□□ -0.31
PVT1-203ENST00000513868 GFRA2O00451 464 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 RAMP2O60895 175 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 CPP00450 1065 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 GSTA2P09210 222 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 HDCP19113 662 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 PRKCHP24723 683 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 MGAT1P26572 445 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 SMAD3P84022 425 aaKnown RBP13.1□□□□□ -0.31
PVT1-203ENST00000513868 TNK2Q07912 1038 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 SLC10A7Q0GE19 358 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
PVT1-203ENST00000513868 STEAP4Q687X5 459 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 ADGRD1Q6QNK2 874 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 Q6ZNB5 142 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 TEX26Q8N6G2 289 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 DCAKDQ8WVC6 231 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.319e-7■■■□□ 15.2
PVT1-203ENST00000513868 UBP1Q9NZI7 540 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
PVT1-203ENST00000513868 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
PVT1-203ENST00000513868 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 CCL16O15467 120 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 LATS1O95835 1130 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 MT-CYBP00156 380 aaPredicted RBP13.09□□□□□ -0.31
PVT1-203ENST00000513868 RB1P06400 928 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 GJA1P17302 382 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
PVT1-203ENST00000513868 CCR2P41597 374 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 CDH4P55283 916 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 SESN2P58004 480 aaPredicted RBP13.09□□□□□ -0.31
PVT1-203ENST00000513868 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 PPARDQ03181 441 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 IL10RBQ08334 325 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 IHHQ14623 411 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 KLHL38Q2WGJ6 581 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 ANO4Q32M45 955 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms