RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PRKAA2P54646 552 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 PPIDQ08752 370 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 TRAF2Q12933 501 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 CYP51A1Q16850 503 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 PFKFB4Q16877 469 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SAMD4BQ5PRF9 694 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 SCARA3Q6AZY7 606 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 LCLAT1Q6UWP7 414 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.18□□□□□ -1.1
NEK1-208ENST00000512193 METTL6Q8TCB7 284 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 KLRG1Q96E93 195 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 RNF145Q96MT1 663 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 FOPNLQ96NB1 174 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TRAPPC9Q96Q05 1148 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 KCTD14Q9BQ13 255 aaPredicted RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 PIDD1Q9HB75 910 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 GBA2Q9HCG7 927 aaPredicted RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 SCUBE2Q9NQ36 999 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ENTPD7Q9NQZ7 604 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TAS2R13Q9NYV9 303 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 PRKAG2Q9UGJ0 569 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 MCM8Q9UJA3 840 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 FBXO5Q9UKT4 447 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 CKMP06732 381 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 CCNB1P14635 433 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SLC2A4P14672 509 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ALDH7A1P49419 539 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 MAXP61244 160 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 RHOAP61586 193 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 POLD3Q15054 466 aaPredicted RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 LRRC8BQ6P9F7 803 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 DDX53Q86TM3 631 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 CLVS1Q8IUQ0 354 aaPredicted RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 SIAH1Q8IUQ4 282 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 FAM126BQ8IXS8 530 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 CARNMT1Q8N4J0 409 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 GLIS1Q8NBF1 620 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 VPS37AQ8NEZ2 397 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 FNIP1Q8TF40 1166 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 GPR20Q99678 358 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ANKRD6Q9Y2G4 727 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 PCDHB7Q9Y5E2 793 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 RGSL1A5PLK6 1076 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 C5orf60A6NFR6 353 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 C5orf58C9J3I9 102 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 BIRC5O15392 142 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TMEM63AO94886 807 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ZNF682O95780 498 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TFEBP19484 476 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 NUP107P57740 925 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 NEDD8Q15843 81 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 SPDYE7PQ495Y7 208 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 KHDC1Q4VXA5 237 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 AARS2Q5JTZ9 985 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TAF2Q6P1X5 1199 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 MYO1HQ8N1T3 1032 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ZNF556Q9HAH1 456 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 TUBGCP4Q9UGJ1 667 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ZNF839A8K0R7 811 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 BTN3A1O00481 513 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SCAMP3O14828 347 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 DAB1O75553 588 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 VNN1O95497 513 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LDLRP01130 860 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ETS2P15036 469 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 AXLP30530 894 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 GSTT1P30711 240 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 FMO4P31512 558 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 CDH13P55290 713 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 VWA5B1Q5TIE3 1220 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 TRMT10BQ6PF06 316 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SLC4A11Q8NBS3 891 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 DDHD1Q8NEL9 900 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 LPPQ93052 612 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SERPINB11Q96P15 392 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ZNF317Q96PQ6 595 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 TINF2Q9BSI4 451 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SEMA4BQ9NPR2 832 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 NR2E3Q9Y5X4 410 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 NALCNQ8IZF0 1738 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 ATP5F1P24539 256 aaPredicted RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 CD86P42081 329 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 GRIA3P42263 894 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 PSME3P61289 254 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 MRPS5P82675 430 aaKnown RBP8.17□□□□□ -1.1
NEK1-208ENST00000512193 PDK3Q15120 406 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 SLC39A12Q504Y0 691 aa8.17□□□□□ -1.1
NEK1-208ENST00000512193 FAM171A1Q5VUB5 890 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms