RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FBXL12Q9NXK8 326 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SLC6A14Q9UN76 642 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 ACTL7AQ9Y615 435 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 CACNA1EQ15878 2313 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 TMEM131Q92545 1883 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 FAM47DPA6NHR8 397 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 TM4SF5O14894 197 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 ATP9BO43861 1147 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 RNASEH1O60930 286 aaKnown RBP16.9■□□□□ 0.3
DDX41-213ENST00000512027 RNASEH2AO75792 299 aaKnown RBP16.9■□□□□ 0.3
DDX41-213ENST00000512027 LRIG2O94898 1065 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 IL1BP01584 269 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
DDX41-213ENST00000512027 SERPINF2P08697 491 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 SLC8A1P32418 973 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
DDX41-213ENST00000512027 FIGNQ5HY92 759 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 PPM1JQ5JR12 505 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 CADM4Q8NFZ8 388 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 SPON2Q9BUD6 331 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 NEUROG2Q9H2A3 272 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 DNAI1Q9UI46 699 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 SARDHQ9UL12 918 aa16.9■□□□□ 0.3
DDX41-213ENST00000512027 ANKRD62A6NC57 917 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 CBX4O00257 560 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 FSBPO95073 299 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 HOXD12P35452 270 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ACVRL1P37023 503 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 DPP6P42658 865 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 KRT83P78385 493 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 GFPT1Q06210 699 aaPredicted RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 ZNF252P-AS1Q0IIN9 211 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 MAMLD1Q13495 774 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ELAVL3Q14576 367 aaKnown RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 NLRP14Q86W24 1093 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 DCAF4L2Q8NA75 395 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 CEP76Q8TAP6 659 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 DNASE2BQ8WZ79 361 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 NTAN1Q96AB6 310 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 PPP1R9BQ96SB3 815 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 OMDQ99983 421 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 CNPY3Q9BT09 278 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 C2orf49Q9BVC5 232 aaPredicted RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 EDEM3Q9BZQ6 932 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 XPO4Q9C0E2 1151 aaKnown RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 OSBPL2Q9H1P3 480 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 GPATCH2LQ9NWQ4 482 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 NCKAP1Q9Y2A7 1128 aa16.89■□□□□ 0.29
DDX41-213ENST00000512027 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.89■□□□□ 0.29
DDX41-213ENST00000512027 ILVBLA1L0T0 632 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 RNF103O00237 685 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 GYPCP04921 128 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 DRD3P35462 400 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 NRG1Q02297 640 aaPredicted RBP16.88■□□□□ 0.29
DDX41-213ENST00000512027 GNA12Q03113 381 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 ACBD5Q5T8D3 534 aaPredicted RBP16.88■□□□□ 0.29
DDX41-213ENST00000512027 PLEKHA7Q6IQ23 1121 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 USP30Q70CQ3 517 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 TMC6Q7Z403 805 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 HDDC3Q8N4P3 179 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 BIRC7Q96CA5 298 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 TBC1D31Q96DN5 1066 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 TNKS2Q9H2K2 1166 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 MYO1AQ9UBC5 1043 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 CNOT8Q9UFF9 292 aaKnown RBP16.88■□□□□ 0.29
DDX41-213ENST00000512027 FZD10Q9ULW2 581 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 HS3ST2Q9Y278 367 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 DOCK9Q9BZ29 2069 aa16.88■□□□□ 0.29
DDX41-213ENST00000512027 A0A1W2PQJ5 194 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 ARHGAP33O14559 1287 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 GIPC1O14908 333 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 CREB3O43889 395 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 ZMPSTE24O75844 475 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 ADH1BP00325 375 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 IGHV4-34P06331 123 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 CTSLP07711 333 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 RHOQP17081 205 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 PSMA2P25787 234 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
DDX41-213ENST00000512027 GALCP54803 685 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 ARF5P84085 180 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 BNC1Q01954 994 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 SCAPQ12770 1279 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 GRIK2Q13002 908 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 DAB2IPQ5VWQ8 1189 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 C22orf39Q6P5X5 142 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 NCEH1Q6PIU2 408 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms