RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 EIF3IQ13347 325 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 DCAF6Q58WW2 860 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 NADSYN1Q6IA69 706 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 GUSBP11Q6P575 273 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ABI3BPQ7Z7G0 1075 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 HORMAD1Q86X24 394 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 APCDD1Q8J025 514 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ZSCAN1Q8NBB4 408 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 OR13H1Q8NG92 308 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 FRS2Q8WU20 508 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 GLMNQ92990 594 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 LIN37Q96GY3 246 aaPredicted RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 INTS4Q96HW7 963 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 PPP1R9BQ96SB3 815 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 HESX1Q9UBX0 185 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 CACNA1DQ01668 2161 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 A0A1W2PQU0 124 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 CLEC18AA5D8T8 446 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 PLD2O14939 933 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 NOBOXO60393 691 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 NR3C1P04150 777 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 VAV1P15498 845 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 RPIAP49247 311 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
RNF4-216ENST00000511859 DAOAP59103 153 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 TAS2R38P59533 333 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 ENPEPQ07075 957 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 NR0B2Q15466 257 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 TBR1Q16650 682 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 Q6ZSR6 202 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
RNF4-216ENST00000511859 SLC22A18ASQ8N1D0 253 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 CFAP52Q8N1V2 620 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 ZNF548Q8NEK5 533 aaPredicted RBP11.91□□□□□ -0.5
RNF4-216ENST00000511859 IRGQQ8WZA9 623 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 TATDN2Q93075 761 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 MYEOVQ96EZ4 313 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
RNF4-216ENST00000511859 PMS2P1A4D2B8 440 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 A6NNZ2 444 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ATP9BO43861 1147 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 NME1P15531 152 aaKnown RBP11.9□□□□□ -0.5
RNF4-216ENST00000511859 PRLRP16471 622 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 OXCT1P55809 520 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 NUCB2P80303 420 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 PPP3CAQ08209 521 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 NNTQ13423 1086 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 SPIDRQ14159 915 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ACCSLQ4AC99 568 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
RNF4-216ENST00000511859 FBXO39Q8N4B4 442 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
RNF4-216ENST00000511859 KLK6Q92876 244 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
RNF4-216ENST00000511859 NAT6Q93015 286 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 NOX5Q96PH1 765 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 PSMG3-AS1Q96PY0 264 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 MYOCQ99972 504 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
RNF4-216ENST00000511859 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ADNPQ9H2P0 1102 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 TLR6Q9Y2C9 796 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 MAN2B2Q9Y2E5 1009 aa11.9□□□□□ -0.5
RNF4-216ENST00000511859 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 NVLO15381 856 aaKnown RBP11.89□□□□□ -0.51
RNF4-216ENST00000511859 AQP9O43315 295 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 LIPCP11150 499 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 KRT13P13646 458 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
RNF4-216ENST00000511859 LCP1P13796 627 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 GTF2H1P32780 548 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 NASPP49321 788 aaPredicted RBP11.89□□□□□ -0.51
RNF4-216ENST00000511859 CLDN2P57739 230 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 STK4Q13043 487 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 MORC3Q14149 939 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 TGIF1Q15583 401 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 MANEAQ5SRI9 462 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 PIP5KL1Q5T9C9 394 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 KRT39Q6A163 491 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 GCNT7Q6ZNI0 430 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 BTN2A2Q8WVV5 523 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms