RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-208ENST00000511754 FAM110DQ8TAY7 271 aaPredicted RBP3.56□□□□□ -1.84
TNPO1-208ENST00000511754 CLEC4CQ8WTT0 213 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 HMGB4Q8WW32 186 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 DUX5Q96PT3 197 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 STK33Q9BYT3 514 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 TP63Q9H3D4 680 aaPredicted RBP3.56□□□□□ -1.84
TNPO1-208ENST00000511754 HIPK3Q9H422 1215 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 SLC25A13Q9UJS0 675 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 PKP3Q9Y446 797 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 PCDHGB2Q9Y5G2 931 aa3.56□□□□□ -1.84
TNPO1-208ENST00000511754 ANO9A1A5B4 782 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 PRSS47A8MTI9 375 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 SMTNL1A8MU46 457 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 GRID2O43424 1007 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 TMCC1O94876 653 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 ZBTB11O95625 1053 aaPredicted RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 NBPF7P0C2Y1 421 aaPredicted RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 MYZAPP0CAP1 466 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 TM4SF4P48230 202 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 AK2P54819 239 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 FAM3BP58499 235 aaPredicted RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 SLC39A14Q15043 492 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 TBRG1Q3YBR2 411 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 C5orf22Q49AR2 442 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 CLIP4Q8N3C7 705 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 WFIKKN2Q8TEU8 576 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 FAM216AQ8WUB2 273 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 SLC35F5Q8WV83 523 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 RSC1A1Q92681 617 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 APOLD1Q96LR9 279 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 GFM1Q96RP9 751 aaKnown RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 MECRQ9BV79 373 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 KLHL31Q9H511 634 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 RETREG1Q9H6L5 497 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 ZNF556Q9HAH1 456 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 ZDHHC7Q9NXF8 308 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 PLEKHB1Q9UF11 243 aaPredicted RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 PCDHA10Q9Y5I2 948 aa3.55□□□□□ -1.84
TNPO1-208ENST00000511754 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
TNPO1-208ENST00000511754 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 PLSCR5A0PG75 271 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 TMEM247A6NEH6 219 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 SLC38A8A6NNN8 435 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 EFCAB8A8MWE9 144 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 SLC16A5O15375 505 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 KCNJ13O60928 360 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 GAS8-AS1O95177 125 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ENO3P13929 434 aaPredicted RBP3.54□□□□□ -1.84
TNPO1-208ENST00000511754 PDLIM4P50479 330 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 NUDT6P53370 316 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 RCAN1P53805 252 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ZBTB16Q05516 673 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 COASYQ13057 564 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ZACNQ401N2 412 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 OTUD3Q5T2D3 398 aaPredicted RBP3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ATPAF1Q5TC12 328 aaPredicted RBP3.54□□□□□ -1.84
TNPO1-208ENST00000511754 C9orf57Q5W0N0 161 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ARMC9Q7Z3E5 817 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 ZNF329Q86UD4 541 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 SYTL1Q8IYJ3 562 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 KIAA1191Q96A73 305 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 C8orf48Q96LL4 319 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 TRIM31Q9BZY9 425 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 IGSF9Q9P2J2 1179 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 CNTN6Q9UQ52 1028 aa3.54□□□□□ -1.84
TNPO1-208ENST00000511754 SCN5AQ14524 2016 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 LOC102724159A0A0B4J2E5 919 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 C17orf102A2RUQ5 167 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 AGAP5A6NIR3 686 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 ASNA1O43681 348 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 PPP1R3DO95685 299 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 UNGP13051 313 aaPredicted RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 NAGAP17050 411 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 GNLYP22749 145 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 GSTM2P28161 218 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 PPP3CCP48454 512 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 AMTP48728 403 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 CDH12P55289 794 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 EEF1A2Q05639 463 aaKnown RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 ALKBH1Q13686 389 aaKnown RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 PWP2Q15269 919 aaKnown RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 KIF19Q2TAC6 998 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 TMEM71Q6P5X7 295 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 KSR2Q6VAB6 950 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 RINLQ6ZS11 566 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 ZDHHC23Q8IYP9 409 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 TCP11L2Q8N4U5 519 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 CEP76Q8TAP6 659 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 PARD3BQ8TEW8 1205 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 TMED6Q8WW62 240 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 C18orf8Q96DM3 657 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 TNIP3Q96KP6 325 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 NPAS1Q99742 590 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 MYD88Q99836 296 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 IFT27Q9BW83 186 aa3.53□□□□□ -1.84
TNPO1-208ENST00000511754 FRMD8Q9BZ67 464 aaPredicted RBP3.53□□□□□ -1.84
TNPO1-208ENST00000511754 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.53□□□□□ -1.841e-8■■■■■ 34.4
TNPO1-208ENST00000511754 BRD8Q9H0E9 1235 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms