RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 RNF219Q5W0B1 726 aaPredicted RBP12.34□□□□□ -0.43
COPS4-210ENST00000511708 BSPRYQ5W0U4 402 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 Q6ZSR6 202 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 HORMAD1Q86X24 394 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 CARNMT1Q8N4J0 409 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 RNF139Q8WU17 664 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 EDEM1Q92611 657 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 BMFQ96LC9 184 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 APOBEC3GQ9HC16 384 aaKnown RBP12.34□□□□□ -0.43
COPS4-210ENST00000511708 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 CGNQ9P2M7 1197 aaKnown RBP12.34□□□□□ -0.43
COPS4-210ENST00000511708 HIVEP3Q5T1R4 2406 aa12.34□□□□□ -0.43
COPS4-210ENST00000511708 A6NNZ2 444 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 YJEFN3A6XGL0 299 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 E7ENQ6 273 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 H3BM21 787 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 EXOC3O60645 756 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 CCKBRP32239 447 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 TXLNAP40222 546 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 STAT6P42226 847 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
COPS4-210ENST00000511708 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 NUGGCQ68CJ6 796 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 KYAT3Q6YP21 454 aaKnown RBP12.33□□□□□ -0.44
COPS4-210ENST00000511708 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 PARGQ86W56 976 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 ZFAND4Q86XD8 727 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 UNC45BQ8IWX7 931 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 NELFCDQ8IXH7 590 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 OR8D1Q8WZ84 308 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 CLIC6Q96NY7 704 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 IL12RB2Q99665 862 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
COPS4-210ENST00000511708 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
COPS4-210ENST00000511708 HS3ST3A1Q9Y663 406 aa12.33□□□□□ -0.44
COPS4-210ENST00000511708 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 A0A1W2PQC6 194 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 TYW5A2RUC4 315 aaKnown RBP12.32□□□□□ -0.44
COPS4-210ENST00000511708 POM121BA6NF01 834 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.32□□□□□ -0.44
COPS4-210ENST00000511708 D6RAR5 112 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 H3BQV1 296 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 TULP2O00295 520 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 MCF2LO15068 1137 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 ALOX15BO15296 676 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 CD58P19256 250 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 NNMTP40261 264 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 RPIAP49247 311 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 TMEM259Q4ZIN3 620 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 ARHGAP17Q68EM7 881 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 PTAR1Q7Z6K3 402 aaPredicted RBP12.32□□□□□ -0.44
COPS4-210ENST00000511708 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 TMPRSS4Q9NRS4 437 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
COPS4-210ENST00000511708 PISDQ9UG56 409 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 CEP83Q9Y592 693 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 ESPL1Q14674 2120 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 PRRC2CQ9Y520 2896 aaKnown RBP12.32□□□□□ -0.44
COPS4-210ENST00000511708 F8P00451 2351 aa12.32□□□□□ -0.44
COPS4-210ENST00000511708 ATP9BO43861 1147 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 JMJD7P0C870 316 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 JUNDP17535 347 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 ITIH1P19827 911 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 ZNF394Q53GI3 561 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 TPRG1LQ5T0D9 272 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 TICAM1Q8IUC6 712 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 CFAP52Q8N1V2 620 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 SCML4Q8N228 414 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 SLC4A11Q8NBS3 891 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 LMX1AQ8TE12 382 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 GLMNQ92990 594 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 HEXIM2Q96MH2 286 aaKnown RBP12.31□□□□□ -0.44
COPS4-210ENST00000511708 DDX50Q9BQ39 737 aaKnown RBP12.31□□□□□ -0.44
COPS4-210ENST00000511708 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
COPS4-210ENST00000511708 PANK2Q9BZ23 570 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
COPS4-210ENST00000511708 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 SYNDIG1Q9H7V2 258 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 KBTBD4Q9NVX7 518 aa12.31□□□□□ -0.44
COPS4-210ENST00000511708 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms