RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TNPO2O14787 897 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TSPAN4O14817 238 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TULP3O75386 442 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 RBMXL2O75526 392 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 MBD4O95243 580 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TNFAIP3P21580 790 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 ATP5F1P24539 256 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 DDIT3P35638 169 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 GPD2P43304 727 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 NR1H2P55055 460 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 CDH15P55291 814 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 RPS13P62277 151 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 SRSF4Q08170 494 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 PMPCAQ10713 525 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 SRSF7Q16629 238 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 SUPT20HL1Q3ZLR7 823 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 KIAA1755Q5JYT7 1200 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 UBAP2Q5T6F2 1119 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TMEM268Q5VZI3 342 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TTLL5Q6EMB2 1281 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 AADACL2Q6P093 401 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM57BQ71RH2 274 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 B4GALNT4Q76KP1 1039 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 RSRC2Q7L4I2 434 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 SCAIQ8N9R8 606 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 LSM14AQ8ND56 463 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 DNAAF1Q8NEP3 725 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 CNOT9Q92600 299 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 KAT2AQ92830 837 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 VOPP1Q96AW1 172 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZBTB10Q96DT7 871 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 KIF1BPQ96EK5 621 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZNF419Q96HQ0 510 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 EYA3Q99504 573 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 PHF7Q9BWX1 381 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 INTS2Q9H0H0 1204 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TTYH1Q9H313 450 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 UNC45AQ9H3U1 944 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 VEZTQ9HBM0 779 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 PREBQ9HCU5 417 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 Q9N2J8 555 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TMEM45AQ9NWC5 275 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZNF69Q9UC07 566 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 PNMA2Q9UL42 364 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 LAMP3Q9UQV4 416 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 TMEM98Q9Y2Y6 226 aa3.7□□□□□ -1.82
TRAPPC11-207ENST00000511409 OR6C68A6NDL8 312 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 WIPF3A6NGB9 483 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM90A7PA6NKC0 464 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM90A22PA8MWA6 464 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM90A12PA8MX19 464 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM90A23PA8MXZ1 464 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 F8W810 466 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 PER2O15055 1255 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 TP73O15350 636 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 LATS1O95835 1130 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 IL1AP01583 271 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ABCD3P28288 659 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 CD38P28907 300 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 GJC1P36383 396 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 PTPN9P43378 593 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 MTNR1AP48039 350 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ID2Q02363 134 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 CAMK1Q14012 370 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 RALBP1Q15311 655 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 SLC18A3Q16572 532 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FBXO43Q4G163 708 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ALG10Q5BKT4 473 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ALG10BQ5I7T1 473 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM69AQ5T7M9 428 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 NAA35Q5VZE5 725 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAAH2Q6GMR7 532 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 NAPEPLDQ6IQ20 393 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ACAD10Q6JQN1 1059 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 GJB7Q6PEY0 223 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 SLC2A7Q6PXP3 512 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 IGFN1Q86VF2 1251 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 TSPYL6Q8N831 410 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZNF366Q8N895 744 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 PCYOX1LQ8NBM8 494 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 TNIP2Q8NFZ5 429 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 PRSS3P2Q8NHM4 247 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 BCAS4Q8TDM0 211 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 TBC1D22AQ8WUA7 517 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 HSPH1Q92598 858 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 SIGLEC11Q96RL6 698 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 MPHOSPH8Q99549 860 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 PIMREGQ9BSJ6 248 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FUZQ9BT04 418 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 FRMD8Q9BZ67 464 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 SEMA4CQ9C0C4 833 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 LMAN2LQ9H0V9 348 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 HIPK3Q9H422 1215 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 SLC32A1Q9H598 525 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 EPHX3Q9H6B9 360 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZNF304Q9HCX3 659 aa3.69□□□□□ -1.82
TRAPPC11-207ENST00000511409 NRIP3Q9NQ35 241 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms