RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TCEAL6Q6IPX3 200 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 LEKR1Q6ZMV7 388 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 Q6ZVU0 165 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 METTL3Q86U44 580 aaKnown RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 SH2D3CQ8N5H7 860 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 DCAF4L2Q8NA75 395 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 ATP11CQ8NB49 1132 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 TCEAL3Q969E4 200 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 HSPA12BQ96MM6 686 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 EPAS1Q99814 870 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 NHEJ1Q9H9Q4 299 aaPredicted RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 FBRSQ9HAH7 460 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 TMEM248Q9NWD8 314 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 ACTL7AQ9Y615 435 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 WDR87Q6ZQQ6 2873 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SSU72P8A0A1W2PR75 194 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 MID1O15344 667 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SMAD6O43541 496 aaKnown RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 ATP9BO43861 1147 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 RNASEH1O60930 286 aaKnown RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 ZMPSTE24O75844 475 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 DNTTP04053 509 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SRCP12931 536 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 ITPKAP23677 461 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 IL1R2P27930 398 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 MAPKAPK2P49137 400 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 AIF1P55008 147 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 TPI1P60174 286 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SEMA3BQ13214 749 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 CST6Q15828 149 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 CSRP2Q16527 193 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SMTNL2Q2TAL5 461 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 POM121L1PQ3SYA9 428 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 PPP6R3Q5H9R7 873 aaPredicted RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 ERMARDQ5T6L9 678 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 LYSMD4Q5XG99 296 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 ZNF783Q6ZMS7 281 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 PRR23CQ6ZRP0 262 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 CPNE8Q86YQ8 564 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 SLC41A1Q8IVJ1 513 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 ARHGEF2Q92974 986 aaKnown RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 CCDC42Q96M95 316 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 FAM129BQ96TA1 746 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 TNKS2Q9H2K2 1166 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 PABPC3Q9H361 631 aaKnown RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 ZWILCHQ9H900 591 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 WSB2Q9NYS7 404 aaPredicted RBP14.3□□□□□ -0.12
DDX41-212ENST00000511040 HS3ST2Q9Y278 367 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 PCDHGA5Q9Y5G8 931 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 CEP192Q8TEP8 1941 aa14.3□□□□□ -0.12
DDX41-212ENST00000511040 GVINP1Q7Z2Y8 2422 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 A0A1W2PP55 124 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 PATE3B3GLJ2 98 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 EEF2KO00418 725 aaKnown RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 PLK4O00444 970 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 RAMP2O60895 175 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 LRP3O75074 770 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 IL1BP01584 269 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 H2AFZP0C0S5 128 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 OXTRP30559 389 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 SLC8A1P32418 973 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ACSL1P33121 698 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 SSR1P43307 286 aaKnown RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 METAP1P53582 386 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ARF5P84085 180 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ZNF33AQ06730 810 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ELAVL3Q14576 367 aaKnown RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 TTC31Q49AM3 519 aaPredicted RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 KCNT1Q5JUK3 1230 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 PLA2G2CQ5R387 149 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 TXNRD3NBQ6F5E7 133 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 H2AFVQ71UI9 128 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 TC2NQ8N9U0 490 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ZNF564Q8TBZ8 553 aaPredicted RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 HSPH1Q92598 858 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 ACE2Q9BYF1 805 aaPredicted RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 VPS45Q9NRW7 570 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 TMEM74BQ9NUR3 256 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 CTTNBP2NLQ9P2B4 639 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 SERGEFQ9UGK8 458 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 NYNRINQ9P2P1 1898 aaKnown RBP14.29□□□□□ -0.12
DDX41-212ENST00000511040 NUP205Q92621 2012 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 NUMA1Q14980 2115 aa14.29□□□□□ -0.12
DDX41-212ENST00000511040 TMEM110-MUSTN1A8MSY1 372 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 MEI4A8MW99 385 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 MYO1FO00160 1098 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 GDF9O60383 454 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 ZNF806P0C7X5 589 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms