RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ELAVL3Q14576 367 aaKnown RBP12.36□□□□□ -0.43
CHFR-208ENST00000511001 DLG2Q15700 870 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 KCNT1Q5JUK3 1230 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 LAYNQ6UX15 382 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 SETD3Q86TU7 594 aaPredicted RBP12.36□□□□□ -0.43
CHFR-208ENST00000511001 PHF13Q86YI8 300 aaPredicted RBP12.36□□□□□ -0.43
CHFR-208ENST00000511001 GANCQ8TET4 914 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
CHFR-208ENST00000511001 CAMK1GQ96NX5 476 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 SLC32A1Q9H598 525 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 VPS51Q9UID3 782 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 VPS28Q9UK41 221 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 FZD4Q9ULV1 537 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 HS3ST2Q9Y278 367 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
CHFR-208ENST00000511001 ARID1BQ8NFD5 2236 aaPredicted RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 TDRD6O60522 2096 aaKnown RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 A0A1W2PPC4 97 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 K7ERQ8 282 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 SH3BP5O60239 455 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 ADH1BP00325 375 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 IL1BP01584 269 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 GOT1P17174 413 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 GLDCP23378 1020 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 PTPN9P43378 593 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 GRIA4P48058 902 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 ADPRHP54922 357 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 NRG1Q02297 640 aaPredicted RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 SFSWAPQ12872 951 aaKnown RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 FOXC1Q12948 553 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 CDO1Q16878 200 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 HLA-BQ31612 363 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 ACBD5Q5T8D3 534 aaPredicted RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 LRRC31Q6UY01 552 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 Q6ZVU0 165 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 DCAF4L2Q8NA75 395 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 OR7D4Q8NG98 312 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 OR8D1Q8WZ84 308 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 BAP1Q92560 729 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 CENPIQ92674 756 aaPredicted RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 OMDQ99983 421 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 SYT11Q9BT88 431 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 MUC3BQ9H195 1237 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 GAREM1Q9H706 876 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 ADAM22Q9P0K1 906 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 NEU3Q9UQ49 428 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 FNDC3AQ9Y2H6 1198 aaKnown RBP12.35□□□□□ -0.43
CHFR-208ENST00000511001 SNX11Q9Y5W9 270 aa12.35□□□□□ -0.43
CHFR-208ENST00000511001 ILVBLA1L0T0 632 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 LRRC72A6NJI9 287 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 FAM72CH0Y354 149 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 RNF103O00237 685 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 WNT9AO14904 365 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 MCF2LO15068 1137 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 ALOX15BO15296 676 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 SRGAP2O75044 1071 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 CER1O95813 267 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 WNT1P04628 370 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 CTSLP07711 333 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 KRT3P12035 628 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 SPINK2P20155 84 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 RRM1P23921 792 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 SDC4P31431 198 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 RFC1P35251 1148 aaPredicted RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 ADRA1BP35368 520 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 CCR5P51681 352 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 AFF3P51826 1226 aaKnown RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 HDAC4P56524 1084 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 PPP2CBP62714 309 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 PPP2CAP67775 309 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 COL9A2Q14055 689 aaPredicted RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 ACCSLQ4AC99 568 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 FAM72AQ5TYM5 149 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 FAM72DQ6L9T8 149 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
CHFR-208ENST00000511001 WDR59Q6PJI9 974 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 DBX2Q6ZNG2 339 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 IRF2BP2Q7Z5L9 587 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 FAM72BQ86X60 149 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 NAXDQ8IW45 347 aa12.34□□□□□ -0.43
CHFR-208ENST00000511001 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms