RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 C4orf32Q8N8J7 132 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
KDM3B-207ENST00000510866 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 CXorf40BQ96DE9 158 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 ERP27Q96DN0 273 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 MCRS1Q96EZ8 462 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 SNX27Q96L92 541 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 PPP1R10Q96QC0 940 aaKnown RBP7.29□□□□□ -1.24
KDM3B-207ENST00000510866 KCNK16Q96T55 309 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 DIABLOQ9NR28 239 aa7.29□□□□□ -1.24
KDM3B-207ENST00000510866 COPG1Q9Y678 874 aaKnown RBP7.29□□□□□ -1.24
KDM3B-207ENST00000510866 SLC2A4P14672 509 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CTPS1P17812 591 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CDH2P19022 906 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CORO1AP31146 461 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 FMO1Q01740 532 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 MMRN1Q13201 1228 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 ZNF618Q5T7W0 954 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SCARA3Q6AZY7 606 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NYAP1Q6ZVC0 841 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PHF13Q86YI8 300 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 STK40Q8N2I9 435 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 EXOC2Q96KP1 924 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 THTPAQ9BU02 230 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 C11orf84Q9BUA3 381 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 IKZF4Q9H2S9 585 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NRDE2Q9H7Z3 1164 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CDHR5Q9HBB8 845 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 MPP6Q9NZW5 540 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NDRG2Q9UN36 371 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CFAP73A6NFT4 308 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 MDM4O15151 490 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 BUD23O43709 281 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D4O60343 1298 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PAGE1O75459 146 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NFATC1O95644 943 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 HTR1BP28222 390 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 KBTBD12Q3ZCT8 623 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 MPPE1Q53F39 396 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 FAM9CQ8IZT9 166 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 FBXO25Q8TCJ0 367 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 REPS1Q96D71 796 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 DACH2Q96NX9 599 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D14Q9P2M4 693 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 GNPTGQ9UJJ9 305 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PAIP2BQ9ULR5 123 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PTPN2P17706 415 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 GP5P40197 560 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SLC5A3P53794 718 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SEC13P55735 322 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SULT2A1Q06520 285 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 GPM6BQ13491 265 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CRY1Q16526 586 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SEL1L3Q68CR1 1132 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 CYP20A1Q6UW02 462 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PRSS55Q6UWB4 352 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 MYCBPAPQ8TBZ2 947 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 ASZ1Q8WWH4 475 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SEMA3CQ99985 751 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 DHX33Q9H6R0 707 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 DUS2Q9NX74 493 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 GTF2IRD1Q9UHL9 959 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 AGO1Q9UL18 857 aaKnown RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 DNAJC16Q9Y2G8 782 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 IGLV3-22A0A075B6J6 115 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3DA0A087WVF3 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3IA0A087WXS9 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3EA0A087X179 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3KA0A087X1G2 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 A0A0A0MRY4 1105 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3FA6NER0 549 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3LB9A6J9 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 KRT6AP02538 564 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 KRT6BP04259 564 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3HP0C7X1 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NFKB1P19838 968 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 WASP42768 502 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 KRT6CP48668 564 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 NOMO3P69849 1222 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 GALNT3Q14435 633 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3GQ6DHY5 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3CQ6IPX1 549 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 AADACL2Q6P093 401 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 TBC1D3Q8IZP1 549 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 OR52K1Q8NGK4 314 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SPATA13Q96N96 652 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 ADNPQ9H2P0 1102 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 RNF186Q9NXI6 227 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.28□□□□□ -1.244e-8■■■■□ 26.1
KDM3B-207ENST00000510866 NCKIPSDQ9NZQ3 722 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 SLC24A2Q9UI40 661 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 ZMYM5Q9UJ78 669 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 C1orf232A0A0U1RR37 186 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-207ENST00000510866 FAM107AO95990 144 aa7.28□□□□□ -1.24
KDM3B-207ENST00000510866 RPL17P18621 184 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms